Gene detail

Detailed information of BRAKERYMEP00000014866.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_029206713.2, LOW QUALITY PROTEIN: inverted formin-2-like [Acropora millepora]
Species abbreviation AMYRI · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000014866

ATGGCTAATTTAAAAATCGAGAAGAGATGGAACATTATCCGGCAACAGTTCAACCGCGATGAAATGCAAATTGAAAGCTTCACTATTTCCAACGATGTTTCGGCCGAGTTTTGCGTCCGCTTACTTCGTACTTCACATCTTCAGAATTTTTCCGGGCTCAAAACAAAACTCCAAACAAGCTCCGATCAATGGATTTCAGAATTTCTTATTCAAGGTGGAATGGAAGTCCTCTTTCAAGCCCTGGAAAGATTAAGTCCGTCGGCAGGGAGAATGGCGTTTGTGGAGGCTTTCTTGCAATTAGAATGCGTGAATTGTATCAAAGCCGTTATGAACGCTAAACAGGGTCTGGATTCACTGGTGCAAAACAAGGGTTTGGTTCGCAGTTTGACTGAAGCTCTGGACACGAACAACACCATGataaaaaaacaagtttttgaACTTCTCTCGGCGCTGTGTCTTTATTCCAGTCAAGGACACCAACTGGCAATCGATGCACTGGAGAATTACAAGCTGACCAAGGGACAGAGATACAGATTTAGTCTGATTATCAATGAACTAAAAAATGCCGAAGTGGTTCCTTACATGACCACGTGCCTGGCTTTTATAAACACAATACTCATCGCCACTGAAGACTTTGACGATCGGGTCAGGCTACGAAACGAATTTGCAGGTCTGGGACTGCTGGATATTCTAAGCAATTTGAGACATAACGACGACGAAGATTTGTTGGTTCAACTGGATGTGTTTGAGGAACAAAGATTGGAAGACGAGGAAGAACTCAGTTCTCCCGAAGGAGTTAACCTTACTTCTCATTTAGACGTCTTCCATGCTCTGTTTAAAAAGGTCAGCAACAAGCCACAAGGAGTGAATCTTTTAAGCATCTTGCAAAACTTGCTTCTGATTGAGGATGATTCTCCTGTGTCAGATTCAGTTTGGGAAGTGATAGAGAAACTTGTAAAACGTGCAGTGAACATTGAAAGTGTCACACGAGTGGAATCGCTGTTGGAAGCCGGCGAGAAAGAACTGATTGGCTTGGAAAAGGGAGGCTCTAAGAGGACATCGACCAAAAATGGGCGAAGTGACTCGCCTGACGACAACGTCCAACGAATGTCAGTTGCTGAGCAATCTTCAGAAGATGTAAGGTCAGCTTGTCTGCGGTCCGTCTCGGATGACAAGCAAAATGAAGTTTTCGAAGAAATTCAAACTTCTGCTACCGAAGCCACACTGGAGGAAGCTTGCCCTGTGAATTTTTGCGACGAAGCTTCGTCTTCGCCCTCGGTTCAAATTCTTGAGGGAATCATACAGGGTAACAAGGATAGAGATGCGAGAATTTCACGAAGCAAAAAGGCGACGGAAGTGCGAACATCTAGTGACGATAACCTTCTTGACCTTGAAAGTGTAGCTATCGAACTTGGCGTGGAAAAGCCATCCTCAGCTTCAACTGTCTCGCCACTGCCAGAGCAGTCACACGGTGATGAAGATATAGTGATGGTTCGCACTGCCACAGTTGAATCAGCACCAGCTCCTCCCGCTCCGCCACCTCCGCCCCCATTACCTGGACAAGATACCAGTATTCCGTTCAACATACCCCCTGCTCCGCCTCCACCTCCTGCCCCTGGGGTACCCCCGCCACCGCCGCCACCACCAATAACAGGAATGACCGGGATCCCGCCAGCTCCTCCCCTTCAAGGATTTGGCAATGTGCCACCTCCGCCTCCACTACCAGGAATGGGTGGAGTACCCTTACCACCTCCCCTCGCGGGAATGGGAGGCGTAACCCCATCTCCTCCATTACCCGGTATGGGAGGTGTGCCTCCTCCCCCTCCTCTACCTGGAATGATTGGTGTACCTCCGCCACCCCCTTTGCCTGGAGGTGTACCCACTCCTCCTCCCGGTGGTGTACCGCCCCCACCACCTCTCGGTGGATTTACAGTCACTAGAGGCTATCAGCAGCATATCCAGCGGAGAGTCAGCTGTCCAGTAACCCCCTCTGTTATACCTAAAAGTAAAATGAGATCCCTAGCGTGGCAGAAGCTCCCACCTCACGTGGTACAAAGAAGCAAGACGTGTGTATGGGCGCGAGTACTCGCATTGGAGGTTGTGCAGCCAGATTTCCATCTTGAAGAAGAATGGTTTTGTCAAAAGAAAGCTGTCGCCAAAAAGACGGAATCTAAAAAGAAGGAACCTTCAGAGatCACACTCCTTGACCCGAAAAGGAGTCTCAACGTCAACATATTTATGAAGCAATTCAAAAAATCCAATGAAGAAATCGTGGAGATGATCAGCAAAGGAGATAGCAAGGCGTTTGACGTCGATGTTTTGAAAGCGTTCATCAAACTCTTGCCGGATAACACTGAGAGAGAAATGCTCAAAGGTTTCACCGGAGACAAAAAGCAGCTGGGATCCGCAGAGAAGTTTCTCGTAGCTGTGATATCCATTCCTGGGTACAGCCTCCGCCTTGATGCCATGCTTCAAAAGGAAGAGTTTCAACTCACCCTTGAAACCATTGAACCGAGTATTGAAGCCTTGAAGGGAGCGATCAAAGATATTCTTCAAAGTGAGATTCTGCCTGAGGTTCTTCAGCTGATTCTGATTATCGGCAACTTCTTAAACTCAGGTGGGTACGCTGGAAATGCCGTGGCCTTTAAGATCAATTCACTTCTCAAGATTGTGGATACGCGAGCCAACAAGCCTCGCATGAACCTGATGCATTTCTTAGTGCACGTCGCCGAAGAGAAACGAGAAAAGGTCTTGAAGTTCCCGGATGACATGACACATCTCGACAAAGCGGTCAAATTATCTGTTGACAATATCACAGAGGAGGTGAAAACTCTTAAGTCCAAGTTTAAGGAACTCGACAAAGCGATGAAGAAAGGGCCTAAAGACGTTTCAGCACAGTTTACTGGTTTTATCGAGacTGCAACAAAAAAGGCCAAAGAGCTGGATAACGGCATTACCGAGATAAACGATCTTACAAAACAACTTGCAAATTACTTCTGCGAGGATGAAGGCAAATTAAAGTTACAGGAATTGTTGTGTCTGTTCAAGACATTCTGTGATCAACTTATTACTGCTAAGAAGGAAAACGAACAGTTTCGCATTCAAGAAGAGAGACGTAAAGCGCGTGAGAAAAAGCGCCAAGAAGAAGCAGAGAAAAACGCCAAGGCGGGCGGAACAGTGAAAAAAGGAAGGTTGCCTCCAACGAGTGAGGAGCAGGAAGGCTGTATTGTGGATCGACTGCTGGGAGAAATCCGGAAAGGGTTCCCACTAAGGAAAAGCTCCAGAAACACTCCGTCTGGGACCAAGTCGGCATCTCCCTCGAAGAGAATAAACCGCGAAGAAGGAGGTAATCTTAAAAAGTCAAAGGATGAGATCAGAAAGTTTGCCGCCACGGCCAAGTCGCTGGGCAATAAGTTTGATTCCACGGACAGAGAGTCAGAGAGGATAATGTGA

Transcript

BRAKERYMET00000014866

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6NTV6	Inverted formin-2 OS=Xenopus laevis OX=8355 GN=inf2 PE=2 SV=1
Q0IHV1	Inverted formin-2 OS=Xenopus tropicalis OX=8364 GN=inf2 PE=2 SV=1
Q27J81	Inverted formin-2 OS=Homo sapiens OX=9606 GN=INF2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002138 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06367 all species →	Drf_FH3	Diaphanous FH3 Domain	Repeat	Interproscan
PF02181 all species →	FH2	Formin Homology 2 Domain	Family	Interproscan
PF06346 all species →	Drf_FH1	Formin Homology Region 1	Repeat	Interproscan
PF06371 all species →	Drf_GBD	Diaphanous GTPase-binding Domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010472 all species →	Domain	Formin, FH3 domain	Interproscan
IPR015425 all species →	Domain	Formin, FH2 domain	Interproscan
IPR027649 all species →	Family	Inverted formin-2	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR010473 all species →	Domain	Formin, GTPase-binding domain	Interproscan
IPR042201 all species →	Homologous_superfamily	Formin, FH2 domain superfamily	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR014768 all species →	Domain	Rho GTPase-binding/formin homology 3 (GBD/FH3) domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46345 all species →	INVERTED FORMIN-2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003779 all species →	Molecular Function	actin binding	Interproscan
GO:0016043 all species →	Biological Process	cellular component organization	Interproscan
GO:0030036 all species →	Biological Process	actin cytoskeleton organization	Interproscan
GO:0031267 all species →	Molecular Function	small GTPase binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23958	INF2; inverted formin-2	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.