Gene detail

Detailed information of BRAKERYMEP00000015568.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_044163158.1, LOW QUALITY PROTEIN: uncharacterized protein LOC114962634 [Acropora millepora]
Species abbreviation AMYRI · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000015568

ATGGTGAACCTAACGAAATCGGACTGGGACGATCGAACTTGCTCCTGGGAAATTTACAACGCGGGTCTGGAAAATGCTATCCTGTTGATTTCTGTTCACGATATGAGGTTCCATTACTGCGGCTACGAATATGTCAGGGTCTTCTCCGATGTTGAAGAATTCGTGAACTTTAGAGACTGCACACAGCTGCGTGGTGAATTAGTGAAAGCAGCCTTCGGACAATCCAACAGCATTACCACTGAAATCCGCATTGCAAGTATGGAAAGCTACATGAGGACTCAGTTTGTCGTACTGAAAGATGGGCTTCATTCAGCCCTTTCTCCACTGACGCCCTGGAACATCAGGTTATTGAACAAGACTGAGTCCAGTCTTACCATAGATTGGAGTAGTGGCTATCCCGGTGATTTGGTTGCTGTATTCTTCATAATATCTCTGAATGACACAGAAGCAGATCCTGTGGATGAATTTGACGGTCAAAATGTAGATAAACCGATGCGCTTTCTGAGCGTTGCCGCCAACTCATCCCAGACAGTTGATGTTATAAACGGTCTTCCTCCGTTGACCGAGTTCGTAGCCATTGTCTATCTTGTAGACATCAATAACGACATCTACAAAAGTAATACAATACTTGTGGAGACAGTGGAAAGTGTACCAAGTGAAGCACCTTATCTGTATGACTGGAATATTGATGAGGCCGCGCGAAGCATCTGGTTTCGGTTACATCCTATCGAACAACGCTATCATGGAGGGAGGTTGTTAGGTTATAAGATAACATATTATCAACCTGGGAGAGAAGATGAAAAAACTGTGAAGCAGGTGGACGTGAACACAACAAGAGTCAGTCTGAACGGTTTAACAGAAGGGAAGACCTATGTACTATTTGTTTCTGGATTTACAAGCAAAGGAGTTGGTCCGAACAGAACATTTACGATCGCTTTATGTGGTGGTGAGCTTCAGGAACAGATCGGACAATTTTCCAGCCCTGATTATCCCCGGACCCCATACATTCCACCTGATCAATGGGACGTTTTCCCACGCTGCCACTGGAAACTGCGTCCTCAAGCTCCAAATGTGTCGGTGATATGGCTGACATTCCAAAACTTCTTTTTGGGTGAGAGGGCAGAAGAAGGTCACTGCAGTGGTGGAGTGGAGATTTACATCCCTGGAGTTCATAAATACGACAAAAGGAACCAGACTTACATTTGTGGAAAAGAAACCAACTATTCTCTTTTAATAATGGATAAAAAAGCTGATGTAGAAGCTTGGGGATTCAGCTACCACCGGTACACCAAAGagtttcatgaaaataatggcACGAAATTCCTTGCTGATTTCAAGGCATTGCCTGAAGAATCTGTGTTAGGTCAAACCCTCAATGAATGGACAGAGGTTCAGTTCAATACCAGCAACACATCTGCCTTGATGACGTGGGCCGAGCCTCCAAACAGTTTTCTTAACGGTGCCACTATAGAGGAGTACCTGTTGATCGGAGGAGAAGATCCCACAAAGATATTCCATTTTATAATGTTACCTCAGTCagaaaggcaaaaaaatatAACCGGACTGCAGGGCCGCACGAACTACACCGGTAAAATAATTGCTATCTTAAGCGACGGAAGACGTGGCAGCACTGATTGGATCAGATTTCAAACTAGAGAAGGAATACCTTCTAGGAACCCTTACATCTATTCCCTCGTGTCCATCGATTACAGCACTATTTGGGTCAAGTGGCACCAGATAGAGGAAAAAGATATACGTGGGACTCTACGTGGCTATAGAATACACGTTGAAAAAGCTTACTATTATGATCACTACCAACCGTTTTACAGAGAAGTAACGGTTGGTCCTGATGTAACAGAATACAGTGTCACAGGTCTACCGGCTAACACCTATCTCCGGGTATGGGTTGGAGCATTCACTGCTGTTGGAGAAGGAGTCCAGAGAAATGACTGGTGGATAAAAACGAAATGCGGTTCAACATTGTACAGTAGTTCCGGTGCCCTTCAAAGTCCTGGATACCCAGAAAAAATGGAATATTCCGACTGCATCTGGTATATCCACTCAAGAAACAAGAGTGTTTTTATCTGGGTTGAGCATTACGATATTCCCTACTCGCACGAGTGCTATGAGGCATACGTAGCTGTCGGGGATGACAGTGGTATTCCGCCATACCGATATTGCGGCGAAAGCGGTCAGGTTGGTCTACTCGCTCAAGCACCAAGAATCCCGCTTATTTACTATAGTGGACGCGAATTTGACGGACCGAGAAAAGGTTTTGAGCTTCATTACTTTGTTCTGAATCAGTCCTTTTCGGAAGCGACATTAGTGTCAGACTGGAACATTGTAGACATTTCCAACGTGACAGAGAGAAGTATTACTGTTGAATGGCCTCACTATTCGCCCGATCCTGCTTTCGAACTTGGCCTCTATGCAGTTGTTTGTACTCCAACCTATGGTGAAGCTGGGCCAACCGTTTTTAATGTCGATAAAGCTATTGATAGAGCACAAGTCGGACGTTTGCGCTGGGGCACAAACTACACTGTAGAGATTGTTGCGTTTGTCTACAACAACCAGACTGGAGAGTTTAGCCTAAGGAGAAGTCACAAAGTCTATGTGGAAACTGTTGAGGGAGTCCCACAGGAACCTCCTGAAGGCATTAACACAGAAATATATATCAACATTACTCTTTACCTTAACGTGAGTTGGAGAGCTATTCCGAACGATAGAGTAGACGGCGAATTGCTGGGATACAAAGTGTTTTATCGTATTGGCGACGGTGAATTATCCACCAAAACAGTCGGACCAGATGTCTACCAGACAAATATCGATATTGTAAACGACCCCGAGCCCTACGAAATTAGAGTGGCGGGATTTACAAATGGTGGAATAGGACCCATGAGCTGGCCTCGTGAGAGACTAGgGTGCCAGGGCGTTACTGCTTACAGTCAAATGGGTGTCCTAACCAGTCCTGGGTTTCCACAGAGCACTCCAGGAGGTCTTAATTGCTTCTATTTGTTTTACCCTAAATTCTATCCATCTCCAGTTCAACAATTTCGATTGGTACATGTCGTTGATTTCCTTAAGAGTCGGTGGCACGAAGGAGCACCAAACTGCACaTATTGGCAAGACGATTATGTTGTATGGGCAAATATAAATCCGACACGGGTATTAGCTGGTCCATTCTGCGGAGACGTTGAGCCCTTTGCTTTTATCTCCTGGGGGAACTATGTAGATCCCATTTATTTGGGCTCTTTTACAGGAATTGGACCCCATGAGCGAGGCTTTAATTCAACCTTCTTTGCTCTGCACGATTTTTCAAAGATCAGTGCATCGTTTCTCCCTGCCACTGTAAAAGGCTACGAGGCTGAGTTGAGCTGGTTAACCTCTGGTTTGGGCGAGCAAATTGAGGGATATGTTGTTCTCTACAAAATGGCCAAGGATCGCAGACCATTGTGGAGTTTCAAACGAACACTGCTGACGCAAACGGCATTGGAACTACTTCAGCCTTTGACCAACTACACTACCTGGATATTGGGCTACACTGCCAGTGGAAAGGTCTATGGAAGTAACACCTTTCATTTCACCACAACAGGAgCTCCTGTTGATCGCATATACCCTTACGGCCATTCAGCTGGAGACACTGAACTGACTTTCAATAGCAAGTGTCCTGAAATCAAGATACCTGGAGGTGGACTGAGGTTCTTTGACAGAAGGTTCAGAAAGCTTTTCGTCTGTCCATATGGCACCATTCAGTTCAAAACAGGCCTTTTTAATCAGAGGCCTTACAACTTTGGTCAAAAATATTGGCTGCGTTCCTCTTCAATAATTGCACCATATTGGACAAGAACAGACATTGGTCGTTCATTCACCTCTGGACCATCCAAAGTTTTTTATCACATTTATAGCGGACATGATGACGCCGAAACCCTGCAAGAGGCAACATCTGACGTCTTAAGCGTGTACGGGAATTCGCTGCCGGAGAACAAAACATTTGACGCTACCTGGGTGTTGGTTGTCACATGGGTGAAGCTTCGTCACTTTAACTTGAACCCGATAACAGAAACTTTGGTGAGATTAACTtga

Transcript

BRAKERYMET00000015568

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000210 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00431 all species →	CUB	CUB domain	Domain	Interproscan
PF00041 all species →	fn3	Fibronectin type III domain	Domain	Interproscan
PF06119 all species →	NIDO	Nidogen-like	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR000859 all species →	Domain	CUB domain	Interproscan
IPR003961 all species →	Domain	Fibronectin type III	Interproscan
IPR035914 all species →	Homologous_superfamily	Spermadhesin, CUB domain superfamily	Interproscan
IPR036116 all species →	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR050379 all species →	Family	Type I Cytokine Receptor	Interproscan
IPR003886 all species →	Domain	NIDO domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23036 all species →	CYTOKINE RECEPTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004896 all species →	Molecular Function	cytokine receptor activity	Interproscan
GO:0009897 all species →	Cellular Component	external side of plasma membrane	Interproscan
GO:0019221 all species →	Biological Process	cytokine-mediated signaling pathway	Interproscan
GO:0019955 all species →	Molecular Function	cytokine binding	Interproscan
GO:0043235 all species →	Cellular Component	receptor complex	Interproscan
GO:0007160 all species →	Biological Process	cell-matrix adhesion	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000015568.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.