Gene detail

Detailed information of BRAKERYMEP00000015649.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_044176536.1, histone deacetylase 6-like [Acropora millepora]
Species abbreviation AMYRI · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A0A8I6GM68	Protein deacetylase HDAC6 OS=Rattus norvegicus OX=10116 GN=Hdac6 PE=3 SV=1
Q9UBN7	Protein deacetylase HDAC6 OS=Homo sapiens OX=9606 GN=HDAC6 PE=1 SV=2
Q9Z2V5	Protein deacetylase HDAC6 OS=Mus musculus OX=10090 GN=Hdac6 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001139 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00850 all species →	Hist_deacetyl	Histone deacetylase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023696 all species →	Homologous_superfamily	Ureohydrolase domain superfamily	Interproscan
IPR023801 all species →	Domain	Histone deacetylase domain	Interproscan
IPR050284 all species →	Family	Histone deacetylase and polyamine deacetylase	Interproscan
IPR037138 all species →	Homologous_superfamily	Histone deacetylase domain superfamily	Interproscan
IPR000286 all species →	Family	Histone deacetylase family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10625 all species →	HISTONE DEACETYLASE HDAC1-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000118 all species →	Cellular Component	histone deacetylase complex	Interproscan
GO:0000122 all species →	Biological Process	negative regulation of transcription by RNA polymerase II	Interproscan
GO:0004407 all species →	Molecular Function	histone deacetylase activity	Interproscan
GO:0008134 all species →	Molecular Function	transcription factor binding	Interproscan
GO:0016575 all species →	Biological Process	obsolete histone deacetylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000015649.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.