Gene detail

Detailed information of BRAKERYMEP00000015736.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: CAH3026428.1, unnamed protein product [Porites evermanni]
Species abbreviation AMYRI · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000015736

ATGAGTCTTATGAGGCAGGTTAGCCTTCTAGCAGCTGGTTGCCAACCTTGGAACCTCGATGTATGCGCAGCTAGCTGTAATGGCGATCGATTCGCATACTGCGCAACGCTGGCAGTCTACGTTTATGAGctgGATCGCCAGTTCAATGAATTCCGTCTGTCAGCCATCATGGCACAGCACAAGAAAACTATCACATGTATTTCATGGCATCCCAAGAACCCGGACATCCTTGCAACAGCCAGCAGCGACTGCAGAATTTGCATATGGAGTGTTTCGCAGCAGAAAGTTATCAGCACATTGGACAGCTTCAAAACTGCGCCAGTTTGCATTGGATGGTGTCCACAGGAGAAGGATGCAGTATCCTATATATATGGACGTGGACCCATGCATATTTGGAAATTTACCTCTCCTGCAGACAAGGTGGTATCCAAGTATTTGGAGTCgatgacttttttttctgaggTGTGTCAGTTTCGCTGGAATCAGAAAAAGATAGGAAAACTTGTGTTTGGTCATGTGGATGGAAGCGTTTCTGTAGTAAGCCCAGGACAGAAAGCATTTAAACATCAACTACGTCCTGAAACTGTTGAAGATTCTGACGAAGAGGATCCGGTGACAAGCCTTGAATGGGATCCATTGTCTGTGGATTACCTATTGGTTTCAAATGTACATTACGGCACTAGATTGATTGACACCGAATCCATGACTGTAatcatgaattttaaattgCCAAGCTCAGCAATAAAGATCCATACTTTGGCCTGGGTTCCATCTGCACCAGGAATATTTGTAACTGGTGacACTCAGGCTGGGATTCTACGAGTCTGGAATGTCTCCAAGAGCTCTCCCATGACCAGCATTAAATTAAAACTGACGGGTTTTCATGCTCTTATTGTAGTAGAACCTTTTGAAAACATGACTCGAAATAGGAACTGTCAAACATCTGTTGGATCATCGTCAACATCAGCTGCAAGTGAACCACCTTCATCACCCAACAACATCACATATGCTCTTCCTCCAGCAAGAATTCTTTGCACATTTTTGGATGGTGGTGTTGGTCTGTATGATTTAGGTAAAAGAAAGTGGAACTTCCTCAGAGAAATGGGTCATGTGGAGACTATATTTGATTGCAAATTCAAACCTGAAAATCCAGATTTGTTGGCCACTGCATCATTTGATGGCACAATAAAAGTCTGGGATGTGAACACAATGACTGCTGTGCATTCCTCTCCTGGAAATGAAGGAATCATATATGCTCTTTCGTGGGCCCCAGgaGACATTAACTGCATTTGTGGAGCAACAGCCAAGCAGGGCATCTTCCTCTGGGATATAAACAAAGGAAGAATAACAAAGAGATTTACTGAACATGGCAAACATACTGTTTACAATGTGAGCTGGAATCACAAGGATTCTCGCAGAATAGCTTCCTGTAGTTCAGATGGATCATGCGTTGTGAGGCAAATGGATGGTACTTTGGTGAAAAGGTACAAGCACCCTGGTCCAGTGTATGGTTGTGACTGGAGTCTAAATAACagAGATATGATTGCAACAGGCTGTGAAGATAGATGTGTCAGGGTTTTTTATGTGGCTGCAAGCACTGATCTTCCTTTGAAAACATTCTCTGGTCACACAGCAAAGATCTTCCATGTAAAATGGAGTCCTATACGAGAAGCAATCCTTTGTAGTGGCTCTGATGATGGAACTATAAAAATCTGGGATTACTCAGAGGATTCTTGCGTTCACACATTGAAAGGTCACACTGCTCCAGTGCGGGGGTTATTGTGGAGCCCAGAGCTCCCCTACCTTCTGCTGTCAGGGAGCTGGGACTATGCAATACGAATCTGGGATACACGGGATGGATCTTGCCTGGAAACTGTTTTAGATCATGGAGCGGATGTATATGGTTTGACGTGTCACAGGTTAAGGCCTTTCACTGTAGCGTCATGTTCACGCGACTCCACTGTTAGGATCTGGTCGTTGTCGCATTTAGCGTGTTCCCTGCATATTGACGTGTTGGCCAAGCGACCACTGGAGGAGATTGTGACACCGAATACTGGTAATTAA

Transcript

BRAKERYMET00000015736

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8IZU2	WD repeat-containing protein 17 OS=Homo sapiens OX=9606 GN=WDR17 PE=1 SV=2
Q6BK34	Histone acetyltransferase type B subunit 2 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=HAT2 PE=3 SV=1
P13712	Histone-binding protein MSI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MSI1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004126 (this species only)
Ubiquitin family	UBD\|Other\|Beta-prp · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|CDC20 · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|DWD · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400 all species →	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR001680 all species →	Repeat	WD40 repeat	Interproscan
IPR019775 all species →	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR020472 all species →	Repeat	G-protein beta WD-40 repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44464 all species →	WD REPEAT-CONTAINING PROTEIN 17	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000015736.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.