Gene detail

Detailed information of BRAKERYMEP00000016551.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: KAJ7358929.1, hypothetical protein OS493_020770 [Desmophyllum pertusum]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000016551

ATGGCTTCCAAAGCACCAAAGAAGGTCTTCGCCTTGGAAAAAGCAGAGGATGAAGAGGAAttaaagaaacagaagaaaagcGGAAAAAAGAAGTCTGCGCAATTAGTCGAGAGcacagacgaagaagaagaggaaaaaccAACCACCTCGGATGAAGAATTCATCCAAAAAGATGATGAAGTAGATCTGGCCACCCCCCACACTTCTCCTTtagaagaaatggaaaaaaaattactcaaagCGAGTAAAGAAAAGAGAGCAATCACCGCTGCAAAATCTAAGAAGAAATTAGAGTTCGAGGGagatgacaaagaaaaagatGAGGAATcagtggaagaagaagaagaagaagaagaagaacaaggaaAAGCTGCTAAAGCTGTCAGCGGTCCCCCAAAAAAGACCAAAGACAACAAGTCTAAGGAGGAGAAAAAACcgagaagaaaagcaaaagaggaggaagaagaggaagaggatgGTGACGAAGaaggtgatgataatgataatgatgaaagtgatgatgatgatgatgaattagaCACACCAATAGAATGTCCTATATGTCGTTCAAAAATAATTACAGGAGAGAGCGACAATAATAAGCAATGGTTGATGTGTTCATCCGGAGATTGTAATTTGATGTATCAAAAAGATTTACCGAGCTGGGCTCGATATCTTCATAAGATCGAAGTAAACgtattaaaaaaattcaaagaaccAAGACCTAAAGTGAGATGCAGTGGTCACGATCAAATGGCCGGTATAATGGAAGTCGTTTCAAAAGATGATCCTTCGATCCATGGAAGGatgttttttatttgtaaaaacCCCGTCAAAGACGGGGGAAAATGTGAATTTATCAAGTCTGCCGatgaaacaaaccaacaaaaggCAGGGAAACTATGTGAAAGGTTGCGAGAATCAAGCGAGCGGAAAAAACATATCAGTAAACGCAACACTCGTAAGGTCAAATATCACATGGCCGAATACATGAAGACTCTCAAAgctaaaaaaaggaagaaAGAAGACATGGCTCATTACCGTTACAAGAATGAGGATGGACTGATCTACGCCACAATGAAAGGAAGACCCATTGCAGATCTCGATACCAAATTATTAGAACTAAGAGAAAGCGATTATcatgattttgtgaaaatttACCAAAATTCTTCAAAAGGGTTTCCCATCTTGCAAAACCATTTGATTCACCCTATAAAAACGAGAAATGGTAAAAACGTGGCTGTGATGAACGTCTGGAGAGAGAAAAACGAACCAATAGCAGGTCATATGATAGGTGTGTATGACCTATACATAGGATGGAATCGTGACAGAGATGTATGGAAAGCCTTCGCACATTTGGATAGCATATTGTGTGATAAACCTCTACCGTGGGGGGCACATCAGTACTCGATAGAAAGAGATCTAGAACAATGGGTCGTTTTAGCACGAGAGATCAACGATCATCAATTAGATTTATTAAAATCGAGCGAACAAAATATTCAATTCATCTTtgacaaattacaaaaaatggAGCAGGCAAAGACACCCTTCCAAGTCATGCCCTCCGTGGATGACATAACTCTAAAAGAAAGGCTAGTGGTAATGAATGAAGAACATCCAGAAATGGATTTCAAAAAGTTCCAAGTCTCGAATGGattcaaaattcattgtttggaTGTCCTGTACAAGATGGATGTGTTTTCTATTAAACACAAGTACAACATCTATGAATTGAATGCAACACTTCATGAAACTCTCAAATGTGGATTGAGAAAAgaagttaaaaattttaattttatttttaacgaTAAAGAAATCATGGAAAAAACACTGTCCAGACAATATtacaaaatgtttacaaaagCTTGTCAAAACTGCGGTGACAGACGTGGTGTACAGGTCCACTCGGACATCAGCATACCTTACGACGATGAGGAAATCATCACAGGCTGTGCAAACTGTGTACCTATAGAGGACGAAGAAAAAACTGAAGACGATGAAGAAAAATTGCCGTACTCACGAGAAGTGTCCATTaaggaagaaggagaagaatCAGGCAATACCGATTCAATAAACGATGAGGAAGAAGCTATGGAGCGAACAGGCGATGAAGACGCTGTTGAAATTGGAGAAAATCAGCGGGTTGTGGAGGTAGTGAGGGCTGGTCAGGTCCTACGCCAGACTGGTGATGAAGTACAGAAGGATCCATCTGCTTCGCCGGTGAAGAAAAGACTTCGTTCTGGTCTTGTACTGACTCAAGAAGAGATTCCAATGTCAAAGGCTCGTCCACCAGTGGAACAGAAGGTAAAGAATGAACAAAATTGTCTAAAGCTGCGATAG

Transcript

BRAKERYMET00000016551

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0013882 (this species only)

Pfam domain

No Pfam domain signature was detected for BRAKERYMEP00000016551.1. This gene does have a gene model — the search simply returned no hit.

InterPro

InterPro term	Type	Description	Source
IPR018799 all species →	Family	TRAF3-interacting protein 1	Interproscan
IPR010666 all species →	Domain	Zinc finger, GRF-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31363 all species →	TRAF3-INTERACTING PROTEIN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005813 all species →	Cellular Component	centrosome	Interproscan
GO:0005930 all species →	Cellular Component	axoneme	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan
GO:0030992 all species →	Cellular Component	intraciliary transport particle B	Interproscan
GO:0036064 all species →	Cellular Component	ciliary basal body	Interproscan
GO:0042073 all species →	Biological Process	intraciliary transport	Interproscan
GO:0060271 all species →	Biological Process	cilium assembly	Interproscan
GO:0070507 all species →	Biological Process	regulation of microtubule cytoskeleton organization	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000016551.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.