Gene detail

Detailed information of BRAKERYMEP00000016706.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: CAH3148185.1, unnamed protein product [Porites lobata]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000016706

ATGTCTGATTCTGCAGAGAATTTATTTGCTTCAGCTCCACAAAACTTTGCAGTAGAAGATAATTGGTCTCTCTTTAAAACTACTGTTGCAAAGGCTATGGTTAATTACATTTCTTCTATGAAATACAAGCTCCCTTGGATAACCCCTGAAATCAAACGCCAAACGAGAAAGAAAGATCGATTGCACAAGAAAGCTCTTCGCTATCAGAAACCAGACCACTGGGTGGAGTTTAAGAAACAACAGAACCTTGTTTCAAGGCTTGTTAAAAAATCTCGTAGTGATTACTTGAATAATGTTATCGGAGCAAGCCTTCAGGAGAACCCGCAAAAATTTTGGTCTTATGTCAGATCTTGTAAATCAGATGCTATTGGTATACCCCCTCTGCGATATGGCAATAACCTGTTTGCTACTGACAAAAGTAAGGCCGAGGCACTTAATTCTTATTTCTTCTCAGTATCTACTCAAGAAAAACAACCAATACCTACTAAGCCTACCTCTCCGTACAACCGAATTTCAGATATTGACATTTCAACTCATGGATTAAAACAACTTCTTCAACTAAACCCAAGGAAAGCTTGTGGCCCGGATGAAATTCCAGCTCGTGTCCTTAAAGAGCTGGCTCCATCTATTGCATCTTGGCTCAGCTTTATATTCCAACAGTCCTATGACACCGGTGCAGTACCCTCAGACTGGACTAAAGCCCTGGTTGCAGCTATTCATAAAAAGGATTCAAAGTCAAATCCTGCTAATTATCGTCCTGTTTCTCTTACTTCCTTATGTTGTAAGGTTATGGAACACATTATCTTGAGTCACATTGCACAACACTTGGCTGCAAATAATATCCTGATCGACCAGCAGCATGGATTTAGGCAGCGCTTCTCGTGTGAAACTCAACTTATGTCGGCAGTCAATGACTGGGCTAAATGTATTACCTCGTGTTCACAAACTGATGTAATTCTTCTCGACTTCAGTAAAGCCTTTGACCCTGTACCTCATCAGCATCTACTGCTAAAACTGGATTATTATGGAATAATTTTATGTGGAAAGACTGCAGCATGGATCAAGGCCTTCTTAAGCAATCGCTCCCAAGTGGTCTGGTTTCCTGAGGTGGTGAATGTTTTTATAGACAAAAACATGCTGAAACACCTGAGTTCATCACAAGTTGATTCCTTCTACAATAGTGTTTCTACACTTATTTCTAATCAGTTGAAGGACCTTATAACCAGAACCCTTTCTGCCTGGGAAAGTCTGTTTTATGAGGAGAACAGAAACTGTCTTCCATTATTCAAGATGGAGTTGATTctagatgatgatgatcataTGCAGTTTTATCCTGCTTTGGGTGATGTTGAGGCCGCTGTTCTGCACGTTGTTTCTGCTGTCTCTAGTACCATGCAAACTGTCCCAACTGTGCAGtCATGGTTAGGAGGCGGCAACACAGTGACACATGTGGATGCTAGTGTGGATAAACAAGTATTGTTGAACTGCACAAAATTTCTTAAAGATGCTGTCAATACCAATCTACAGCAACCTGTTGAATACTTACACTCATTTGACAAATACAATGCCCTCGTCTCTGGAGAGGCATCGCAGCATGTCAAAGATTTCATTTTGCAGGAACACTCATTTGAGGATTACACTCAAGAAATTCAAAAGTTCCGTTCACTTGCTCGTGAAATCAGTTCACTACCAACAGTAGCACACTTTGATATGGTTCAGTTAGACTGTGATGATTTAAAGAGAGGTCTGGCCACTAAGGCCAATCTCTTTGCAGATCAGTTGCTTCAGCGACTAGCAGAAGAGCACaggcaagaaaacaaaagAATCATCTCTGAATTTGAAGCGATTAAGGAGCATGCTCTAACGAAGCCCGAGGACACTCGTGAAATGATTGACATGCTCAAGTTTGTTGAAGATGCTAAGACAAAGACTTTGGTCAAACTTGACAGTGATATCAAGGAATCATTCAACCGGCTGTCATATTTGTTGGACGTGTTTACCTTTACCCAAGATGACATGAGCCTCAACTCTACAGTGCTtaattggccaaaaaatattgCTCCCATCTTTGACCAGAATGATGAGATTGTAGTAGCTGcacaaaagagaaatgaaagtgCTTTGTTGGAGAAAAGAGAGAAGGTCATGTTGGAACTGGACAAGCTCAAGAGACGTGTTGAAGAGTTCAAGGAGTACGGTGACATGGATATGATGATGCAATATGTAAAAGAAGTGCAGACTGTTCAAAAGAAACTCAGCGATAGTGTGGAGTCCATTGGCTTCATCAATGAGgAAGAGGACTTATTTAAGTGGGAGCAAACAACCTATCCAGAAGTTGAAGCTATCACCAAAGCTATTGAGCCTTACCAAAAACTCTTCACTACTGTTGTCAAGTGGCAGAGAGCAGAGAAAAAATGGATGGATGGAGCCTTTCTTGATTTAAATGCTGAAGCGACAGAGGCAGAGGTTGAGGAATATGGGCGAGAGATGTACAAGATTGCAAAGGTGTTTCAGGCAATGAAAAAGGGAGCGGACAAAGATAAGAAAGGCCACAGCAGAGTGAAGGATTCAAAGGCCAGGGAAGCTCCAGAGACTGAATTGGCTGCTGTAGTGGTGGCAAAGTCAGTCCAGGATCAGATCAGAGAATTTAAGGAACACATTCCTGTCATAAGTGTCATGTGCAACCCAGGTATTCGTGCACGCCATTGGAAAGCTATGTCTGACATTATTGGATTCGACATCACCCCAGACTCTGGAAGTACTTTACGTAAAGTTTTAAAGTTCAATTTGAAGCCATATATGGAAGAATTTGAGGGCATCAGTGCTGGTGCCAGCAAGGAATTCTCTTTggaaaaagccatgcaaaagaTGGTAGATGAATGGGACAGCATCATATTCAACACAACAGAGTACCGTGATACTGGTGTGTCCATCTTAGCTGCAGTGGATGAAATTCAAACTACACTTGATGATCAGATTGTCAAGACCCAAACAATGAGGGGGTCTCCCTTCATAAAACCATTTGAAACAGAGATAAAGGCGTGGGAGGAGCGTTTGTTGAAGATGCAGGAGATTATTGATGAGTGGCTTAAGGTTCAGGCTCAGTGGCTTTACTTAGAACCCATCTTCAGTTCTGAGGACATCATGCAGCAGATGCCGGAAGAAGGCCGCAAGTTTAAGACCGTTGACAGGAACTGGAGGGACATCATGAACTTTGTCTGCAAAGATCCGAAGGTTTTGTCAGCTACTTCAATGCCAAGTATGTATGATCGATTAAAGGACAGTAATGAATTGCTTGATCAGATCAACAAAGGACTGAATGCttacttggaaaaaaagagGCTCTTCTTCTCCAGgtttttctttttgtccaatGATGAAATGTTGGAGATTTTGTCAGAAACAAAGGATCCATACCGTGTTCAGCCACATCTCAAGAAGTGCTTTGAGGGGATTGCCAAGTTGGAGTTCACGCCTTCTTTGGATATCACTCACATGTACAGCAGTGAAGGGGAGAAGGTTCCCTTGAGTGACACCATATCTACATCAGAAGCACGTGGGGCTGTGGAGAAATGGCTTTTGCAGGTGCAAGATGTAATGCTGGTCAGCATAAGGGATATCATTGAGCGGGCTATACAGgCTTATGCTGCTGATGAAAGGAAAGTGTGGGTGATATCTTGGCCTGGACAGATCGTCATCTGTGTGAATCAGATATACTGGACACAAGAGGTGCATGAAGCTATTCGTTCTGGACCCCATGGACTGAAAGAATATCACGAAAAACTCACCAAACAGCTTTCAGATATCGTAGTTCTTGTTCGTGGCAAGCTGTCTAAGCAGAACCGAACAACCCTTGGAGCCCTGGTAGTGATTGATGTTCATGCCAGAGATGTGGTGCATGACATGGTCCAGAAAGGGGTTTCCAAAGAGAACGATTTTCAGTGGTTATGTCAGATGCGTTACTACTGGGAACAAGACAATTGCTTGGTCAGAATCATCAATGCCACAGTGCGCTATGGATATGAATACCTCGGCAACTCAGGCAGGCTGGTCATCACCCCCCTGACAGATCGTTGTTACCGTACTCTTGTGAGTGCCTTTCATTTAAATCTGGGTGGAGCACCTGAGGGTCCTGCTGGTACTGGAAAAACAGAAACCACCAAGGATTTAGCAAAAGCCCTTGCAATACAGTGTGTTGTTTTTAACTGCTCAGATGGCTTGGATTACCTGCAAATGGGCAAATTCTTTAAAGGTCTGGCATCATGTGGTGCATGGGCTTGCTTTGATGAGTTCAATCGCATTGAGCTGGAGGTGTTGTCAGTGGTGGCTCAACAGATCTTATGTATACAGAGAGCCATAGCTGCTCATCAGGAACGATTCGTGTTTGAGGGAACAGAGTTGAACTTAAATGCTAACTGTTATGTGGCCATAACTATGAATCCTGGGTATGCTGGGCGCTCAGAGCTTCCAGATAACCTGAAGGTGTTGTTCCGCACTGTGGCTATGATGGTACCGGACTATGCCCTGATTGGCGAGATCATGCTGTACTCATATGGTTTTGTCGATGCTCGCAACCTATCCGTGAAGATTGTTACGACCTACAAACTGTGTTCTGAACAGCTCTCGTCACAATTCCATTACGATTATGGTATGCGTGCAGTAAAAGCTGTGTTGGCGGCAGCTGGCAACCTAAAACTCAAGTATCCAGCAGATGATGAAAATGTGCTGTTGCTCAGGTCCATCATGGATGTTAACCTTCCGAAATTTCTCTCCCATGATATTCCACTGTTTGAGGGAATCATTTCTGATTTGTTTCCCGGGGTGTCTTTACCAAAGGCAGACTATGGCACCTTTCTTGAAACAGCCAAAGAGATTTGCGAGAAAAAGAATATCCAGATGGTGGACTTTTTCAGTGAAAAGATCATTCAGACGTATGAAATGATGATCGTTAGACATGGATTTATGATGGTGGGTGATCCATTCTCTGGTAAGACTAAAGTGCTTGAGGTGTTAGCGGAGACTCTGAACTTGCTGGCAGACAGAGGCTACGATGATGATAATGTCAACAAGGTTTGGTTCCGCGTAATCAATCCCAAGTCAATCACCATGGGACAGCTTTTCGGTCAGTTTGATCCTGTCTCACATGAGTGGACAGATGGCATAGTTGCTAACACATTCCGTGAGTATGCCGCAGACCAGACGGAAATCAAGAAGTGGGTCATATTCGATGGACCTATAGATACCCTGTGGATTGAAAGCATGAACACTGTGTTGGATGACAATAAAAAGTTGTGCTTGATGAGCGGGGAGATTATTCAGTTGTCAAACGTAATGAGTTTGATATTTGAATGCAGGGACTTGTCTCAAGCTTCTCCTGCGACTGTCAGTCGATGTGGTATGATCTACCTGGAACCTGCTTCCCTGGGCTGGGAACCTGTGTTAAAATCCTGGATCAACACATTACCTGATGCACTTAAAAATGAACAGGACAAACTTATTACAGCACTTTTCCAATGGGCTTTGCCTGTTTCCATCAGTTTTGTGCGGAAGCAGTGCAAGGAACCAGTGTCTTTGCAAGATAGCAATCTCGCTCGCTCGCTTATGAACCTGGTAGAAATCCAAATGAAAGATGTATCTCAAGAGGACACCAAATATATAAAGTCGTGGTTGATTataaaaagaatgattaaagaGATCCTGGCACTGGATCTCGGTGTTTATAACCTAGTTATTTTTCCGGCTGACCTACGAAGGGCCGTTGATACAGTAAATCACATCGTCGTGCTCTTGCTTGGTGAACTTGAGGCTTGTGGTATTACGCTGAGACTCACCTAA

Transcript

BRAKERYMET00000016706

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q923J6	Dynein axonemal heavy chain 12 OS=Rattus norvegicus OX=10116 GN=Dnah12 PE=2 SV=2
Q3V0Q1	Dynein axonemal heavy chain 12 OS=Mus musculus OX=10090 GN=Dnah12 PE=1 SV=2
Q6ZR08	Dynein axonemal heavy chain 12 OS=Homo sapiens OX=9606 GN=DNAH12 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000142 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17852 all species →	Dynein_AAA_lid	Dynein heavy chain AAA lid domain	Domain	Interproscan
PF12774 all species →	AAA_6	Hydrolytic ATP binding site of dynein motor region	Domain	Interproscan
PF08393 all species →	DHC_N2	Dynein heavy chain, N-terminal region 2	Family	Interproscan
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR042222 all species →	Homologous_superfamily	Dynein heavy chain, domain 2, N-terminal	Interproscan
IPR026983 all species →	Family	Dynein heavy chain	Interproscan
IPR041466 all species →	Domain	Dynein heavy chain, AAA 5 extension domain	Interproscan
IPR043157 all species →	Homologous_superfamily	Dynein heavy chain, AAA1 domain, small subdomain	Interproscan
IPR035699 all species →	Domain	Dynein heavy chain, hydrolytic ATP-binding dynein motor region	Interproscan
IPR042228 all species →	Homologous_superfamily	Dynein heavy chain, linker, subdomain 3	Interproscan
IPR013602 all species →	Domain	Dynein heavy chain, linker	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45703 all species →	DYNEIN HEAVY CHAIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007018 all species →	Biological Process	microtubule-based movement	Interproscan
GO:0030286 all species →	Cellular Component	dynein complex	Interproscan
GO:0045505 all species →	Molecular Function	dynein intermediate chain binding	Interproscan
GO:0051959 all species →	Molecular Function	dynein light intermediate chain binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10408	DNAH; dynein axonemal heavy chain	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.