Gene detail

Detailed information of BRAKERYMEP00000017149.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_020609279.1, guanylate-binding protein 7-like [Orbicella faveolata]
Species abbreviation AMYRI · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000017149

ATGCCACGAACCTTGGGAGACAGTCGTGTAGGCCTGTCAACATCATTTTACAATCATGGCATCTTCTTGAAAGATCAAATACAGGAATTTCATGAAGACGAAGAATTAGCGAGAGCGATTGCACTGTCTTTGGAAATGTTCAATAGACCAAGAAGTGCAGGTGTCCGTGCTGCTGAAGAAGGAACTTGCGCAATACCGCTTTGTTTACCTAACAACTATGTTTGGAACCCACGGTCGGGAAGATGCGTTAAGACAGATGCCGAGCGCTCTTCGCTGGTAGTTGTCGATGAAGCACTTGAGAAACTTAGGGAGGTGAAAGGTCCTGTGTGCGTGGTGTCTGTTGCTGGTCCGTACAGAAAGGGAAAGTCTTACATCTTAAGCGAGGCTTTTGACCAACCAGATGTTTTCCCTCTTGGACATGAAATGGTGGCCGAGACCATGGGAATCTGGGTATGGATTGTACCAGAAAAATATAagGATTGCAATGGACGAGAATTCACAGTTGTGCTCCTGGACTCTGAAGGAATTGATTCTACATCTAGTGAAAGTTTTGACGACCATCAGATTTTCACGTTAACCGTTCTGTTAGCTTCTGTGCTTATCTACAATTCCCAAGGTGTTCCGACTAGAAATGACGTAGAGAAACTGGATTTTATAGTAAAACTCTCTAAAAGAATCCAGGTACGATCCACTGTCTCTGGTGCTTCTCAGAGTCGCCTGACTGAAGACAATGAATTTTTTCACAAAACATTTCCCCAATTCATTTGGCTCTTGAGAGATGCAACACAAGATATTCCAAAAGACTGCAAAGATATGAAGGACTACTTCTTAAAAAAGGTTTTCAAAGAGCCAGATTCAGCAGCCGCAGGTCATCTTGGCCAGAGAGTATCTGAAAGTATCTTGCGCTTCTTTCCTGCTTTTGAAGCGTTTTCTTTGCCTTCTCCCACTACTGATCCTGAGACGATAAAAAGTCTGACCCAGAAAAAAGATCAGGTCAACCCTTTGTTTCTGGACGGTTTAGAGAAGTTCAAACGTTTGATGAGGCGCACTCTATCTCCTAAACACAGCTTCAATGATGGAGAATACGTCACTGGAGAAGGTCTCGCTGCCTTGGTTCGGCTTTACGTTGAAGCGATAAACACCCCGGATGCTATTCCCAATGTGCAGAGGGCTTGGGACACATTCGTGTTAGCAAAATGTGTTGACGTGAAGCAGGCTGCCTTGCAGACGTATGATGCACTCATGACGTCACAGTTATGTGGTGTACTGCCTTGTAGCAACACTGAGATACGATTAAGCCATGGTGCAGCTCTGGAAGCGTGTGAAGCTCAGTTTATAATAGAATTAGCTGGAATCTCTACAAACAAAGTTGAAATGGCTTCGAGAGAGCTCAAGGAATCTGTGGAAAAGAAATTAACCTCATGGGTGACCGACAATGAAGTGAAAACCAGACAATTTTGTAAAGATCTCCTTGACCAACTTAAAAGACTTCATCTGGACCCTGTGTTTCAGCAACTGCAGGGGAGAAGTGCAGCTAAAGTATCTTTTGATGACATAATTGGTGGATATCAGCGGATTAAAGACGAGTACTACGAGTCTGCAATAGGCGCCAAAGATGTCATTGCCAAAGTGTTTGTAGAGCTTCATGCTGAacttttaaaggaaaaagaGCAATACCTGGGCCTACTTAGACAGCTGAAAGACTTTGACGAAGATCTGAGCCGAGAACTGGTCGCCAAGGCCTACCAAGAGCAGGAAAGGAAAAGACTGGAGGAACAACAATCACGCTTGCAGCAGGAAAATCGCCAACGGAAGAAGGAGATGGAAATGTTAATACAAAATCTAGGGGAAGAAAGGAAACGATTTAAGGAACAAATGGAAATTGAAAGGAACGAACATCGAGATCAAATGGAAAACTTGTTGGCGGCGAGCATGAAACACGCCCAAGAGGAACGAAGAGGATTCGTCAGAGAAAATCAAGCTTTACAAGACCACTTTCTGGCATTGCAAGATTGCAacgaagaaaacatgaaaatgataAAGAAGTTGTCTGACGTAGCCGccaaacaaaagagagaaaaagaggaACTCCTTCAAAAGATTAAGAATCAAGCCGATGTCGACCAGGAAACTTTAGTAAAGAGGATCAATGATAAACACGATGAGGAGATGGATGCACTCCGCGATGACATGAATGCAAAGCTGGACGAGGTGATCAAACACTCTCCACCCGATGAAACAGTGAAATGTGGAACACCAGGATTGATAAATAAACGAATCAAAGACGCAGACTCTCTTCAGAGAAAGATAGATAAAACTCATGAGAAACAGCAAGCTGTAGAGAAACCAGGTTTTTTGAAAAAAGCCATGAAATTTGTAGGACAGGTAGTTGTACCATTTGTGGGCACAGTTGTTTCTGCTGTTATACCTGCTGTCGCCCCCATCGTTGCACcagttgctgctgctgctggcAAAGCTATTGAGTTTGCTTCAGACCATATCTGTAGTGTTATGTAA

Transcript

BRAKERYMET00000017149

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q58D72	Atlastin-1 OS=Bos taurus OX=9913 GN=ATL1 PE=2 SV=2
Q60HD2	Atlastin-1 OS=Macaca fascicularis OX=9541 GN=ATL1 PE=2 SV=1
Q8WXF7	Atlastin-1 OS=Homo sapiens OX=9606 GN=ATL1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000346 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02263 all species →	GBP	Guanylate-binding protein, N-terminal domain	Domain	Interproscan
PF02841 all species →	GBP_C	Guanylate-binding protein, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003903 all species →	Conserved_site	Ubiquitin interacting motif	Interproscan
IPR030386 all species →	Domain	GB1/RHD3-type guanine nucleotide-binding (G) domain	Interproscan
IPR015894 all species →	Domain	Guanylate-binding protein, N-terminal	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036543 all species →	Homologous_superfamily	Guanylate-binding protein, C-terminal domain superfamily	Interproscan
IPR003191 all species →	Domain	Guanylate-binding protein/Atlastin, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10751 all species →	GUANYLATE BINDING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000017149.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.