Gene detail

Detailed information of BRAKERYMEP00000017203.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_044172544.1, LOW QUALITY PROTEIN: uncharacterized protein LOC114963798 [Acropora millepora]
Species abbreviation AMYRI · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000017203

ATGAGACGATCAACCATCTTCGCCGTTTTGTGTTCCTTCTTCATTTCCTCGAGTGCATCGCCACTTCTCTTTGCGATTCCAGACGTATACGAAGTCCGCGAGGACGGAAATGCAGTACAACAACGCTATGATTCGAGCATCGGCAGAAAATGGAGCACACAGGTGAATCTGAAGCGACTTGAAGTACTACTCAATGACTTAAGTCTCAACTTGCCAGTCGAGACTTGCatcgaaaagaaaaagactCGCGAAATTTCTTATCCAACCCACGGTGGACAGAACTCCAAGTTTGAGGAAGTTCACCAGAAAGCTGGATTCCATCATGTTCACCGGCCCAACATGGCTGTCAGACCTCACTGCGTGTTTGATGTTGTGGTACCGTTTTTTAATTCCTCCCGCGTTGCGCGGATTCCTGGCGAGTACTGCATCCCTGAACACCTTACTGGCGGGGCAGCAGTGGGCGATTACGATGGAGACGGACTCGAGGATATTTACTTCACAGTATTTCACGGAAACAGTGTGTTGTACAAAAATAATGGCGATGGAACATTCACTGACGTGACCAAAGACACAGGTATTGGACCCAGTTCCTATGCCAATGGAGCTGTCTGGGCGGACATTGATCAAGACGGAGACCTGGATCTGTATGTGACAACAGTGGGTGATACACGGCACTATCTTTATGTTAACTACGGAGGATACTTCATGGAGGAGGCCATGAAGAGGAACTGCTCCTTGCGGACGAGTAACAATAGAAAACTTTCAGGCATGACACCCAACGTTGGAGATTTAAACCGAGATGGATTTGTTGACATCTATGTGACAGAGTGGCTGCCGCATACTTTGGGAAAGGATTTTGACAATGACGGTTGGCAAGAATTGTTGGTTACGGGCGATTTTGGTGGCAGTAGAATGTTCTGGAACACCAAAGGTAACACCTTCACTGAATGCACCGAACACTGTGGCCTTAGAGCCAAGCAGGACGCCATGGGCCATGCGATAGGAGACTGGAACAACGATGGTTACCTGGACTGGTTTTCAAGCGCCATTTGGCACAACGGAACCGAGTGCTCCGTGTCTGGTTGCACGTTCGACAACGAAGGAAACGTGTTATTTCGCAATCTGGGCGGACGGCACTTTGACGAAGCTACAGATCAGgcTGGAGTAGAAAATGGTGGCTGGGGTTGGGGAGCGGCGTTCGTCGATTTTGACAACAACGGATTTTTAGATTTCATCGAGACAAGTGGCATTGATTTTCCAACCACAACAACAGACGATTATTTTCGAGTGAACACGTTGCACCTTTGGAAAAGCTTGGGAGCAGGTCATAATGGAAAAACGGTCGAGGTGTCTTCCTTATATGGATTGAATGGGACGGGACAAGGGCGTGGTCTTCTAAAGTGGGACTACGATGATGATGGCGATGAAGATATCATAGTTTGTAATAACATTGGAGCTCCGTTTTTCTACCAAAATCGACAACGAGAACCCAACAACTGGATTCGAATACGCGTTGTGCATCGatGCCTCAGAAATGTCGGTAAGCTATGCGACAGCTTTGGTGCCCGCGTGCAAGTTATTATGGGAAACAATCACACACAAACCCAGGAAATCGGTTCCAGCACACATTTCCTGGGGCAGAGCTCGCTGGCTGCTCATTTTGGACTGGGGCGAGACAGCGGTAATGTCACTGTGAAAGTCACGTGGCTTTCTAGTTCATTACAAGTGACATACGTCAACGTGCCCCCGAATAGAAGACTTCGAGTCATCCAACCAAGGCTTTCTGACTCTGGGAAGACGTTTCCATACTCTTCTCTTGACAAGTGCTTTTCTTTGGAGCTTCTGAATATCACTGAACAGccatCTCATGCCACGGTTACCATCAACCCAGATGGCAAGACAGtgaaatttcaattaaatcctCATGCGAACCCAGAGGAACTTGATATGCAGTCCTTCACATATGCCGTAAGCCTGGAACCTAGTCCAAGTAATCGGCCACTGGTATCGAACACTACAAGTTTCGTCATTTTTTCCAGTCACCGTAATTACACTTCACCAATGAGCGGGGATTGTCACGCTGGAAGACAGATGCGACCCACACCGAGTGTTACAGATGGCAGACGTCTAGATGGTACTTCATACAACAAAGATAAGGTGTGGTGGGGCGCTGCAATGGAGGATGTTGCGCGTGACTTGCCTGCTATGTACGCTGACGACATCGCAATGCCAGCGGGCACGTGCACTCCAGAGCAGAAGCAAACTGGCAACTGTAGATTTATGGATGCCGTCAACGGATTTGGATCCAACAGGCCCTCGCCAAGAACTATCAGCAATGAACTCTTTCGACAGATTAAGCCAAAGATTAGCGCGCGTAGACTCAGCGATTTACATTCGCACTTTGGCCAGTTCCTCGCGCACGACACGGATTTCTCTAGTCCTCTTCCTCGATATGAATTTGAAGGCGTTTTAAGTGACGTGTGGCTTCCAATTCAAGTGCCCAAGGGAGATGTCCACTTTGATCCGCTGAGCAAAGGAAACATTTATCTCCCGTTTGTGCGCTCGACTTACAACAGGTGTACTGGACGCGTGGCCGACACTCCCAGACAACAAGTCAACAAGATAACTTCTTACATCGACGGCTCTGTAGTTTATGGCGAATCAACACAGAGAAACAAGGCGCTGAGAGAATTTATAGATGGCAAATTAAAACTTGGACCTGGTGATATCATTCCGGACAATACTATGGCTGTTGCTAATGACAATCCGGTCGGCCGTGATGCAGATAGCCTGTTAGCAGCTGGTGACTCCCGCGCCAATGTTCAGCCGGGCTTGATAGCACTTCACACTCTTTTTGTGCGTGAACACAACCGGCTTTGTGACgaatacaaaaagaaatacCCACAGGCCACCGATGAGCAGTTATTTCAGGCTGCGCGTCGACTGGTTGCGGCTGAACTCCAGGCCATCACGTTCCGTGAGTACTTGCCGGCATTGTTGGGGGGCACAGAGCACATTCCACCTTACCAGGGATACAACAGGAGCGTGGACGTTGGAATGAGCAACATCATGGCAACGGCAGCTTTCAGATTTGGGCACAGTCAAGTGAACACTCATTTGTGGCGATATGAAGAGGATGGTACCATGTCACCGTACGGACATCTCCCCCTCAGGGACGCTTACTTCGCCCCTGAGAGAGTGAAACGAGAGGGAGGAATAGACCCCCTGTTCAGGGGAGCTGTGATACAAGCAGCACAGGAAATAGACTTGCAGATGGTAGATGATATGAGGAATGTGTTGTTTCCCTCTGGTCGTGATCGCCAACTCGGTTTGGATCTAGCAGCTATGAACATACAACGGGGAAGAGATCATGGTTTACCAGACTACAATTTCGTCAGAAAAGCGATGGGTTTGTCAGACATCGGTAGTTTCTACAATATCACCGAGGATTCGATGATTGCTCGGAAAATGGAGAAACTTTATCAAGTCAGAGACAATGTTGACTTATGGGTAGGAGGGCTGGCCGAGGACCACGAGGAAGGCAGTGAACTGGGACCGACTTTCCGAAGAATCGTGATGCGTAACTTCCTGAGAATCAGAGACGGCGATAGGTTCTGGTATGAGCATTATCTCACCAAAGAGGAACTCGATAAGGTTAATTCTCTGACACTCGGTGCAATCATACGCCTCAATACCGGATTCAAAAGCGCACCAGACAACGTGTTTTTCTCATCACAGTACTGCGCAGGCGTCAAGGATTTTCAGTGCATACCGCACAATGAAAGTACTTGGGATAGTTGCCAAACGAATGAATCAAAACAGACAACTTTTAGGAAAGAATCGACAAAGCAAAAGCAGCCATGTAACACAAGCTCCGCCTCGGTGACTGATGCTAACGATAATAAAGATGACGGTGCGTTGGTTATTGTCCTTGTGGCGATAAGTGCGACGTTCTTCTTTATATCTGCCATATTGTTTATACTCTACCTCAAACTTTGGTTTCACGTGCGGCAGGGTAAACGGAAAGACAGATCCAATTTGGAGGACCAAACGGAATTTGAAATGAAACATCAGACCAAGAAACATAGTTTAGCCTATATAAACCACATGTCTATTTCATAG

Transcript

BRAKERYMET00000017203

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6TMK4	Peroxinectin A OS=Dictyostelium discoideum OX=44689 GN=poxA PE=1 SV=1
Q8R481	Lactoperoxidase OS=Mesocricetus auratus OX=10036 GN=LPO PE=1 SV=1
Q9VZZ4	Peroxidasin OS=Drosophila melanogaster OX=7227 GN=Pxn PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001593 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13517 all species →	FG-GAP_3	FG-GAP-like repeat	Repeat	Interproscan
PF03098 all species →	An_peroxidase	Animal haem peroxidase	Domain	Interproscan
PF07593 all species →	UnbV_ASPIC	ASPIC and UnbV	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR028994 all species →	Homologous_superfamily	Integrin alpha, N-terminal	Interproscan
IPR050702 all species →	Family	Peroxidase Activity and Reactive Species Generation	Interproscan
IPR013517 all species →	Repeat	FG-GAP repeat	Interproscan
IPR019791 all species →	Family	Haem peroxidase, animal-type	Interproscan
IPR010255 all species →	Homologous_superfamily	Haem peroxidase superfamily	Interproscan
IPR037120 all species →	Homologous_superfamily	Haem peroxidase domain superfamily, animal type	Interproscan
IPR011519 all species →	Domain	ASPIC/UnbV	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11475 all species →	OXIDASE/PEROXIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004601 all species →	Molecular Function	peroxidase activity	Interproscan
GO:0006979 all species →	Biological Process	response to oxidative stress	Interproscan
GO:0020037 all species →	Molecular Function	heme binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19511	PXDN, VPO1; peroxidase	EC:1.11.1.7	Enzymes with EC numbers	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.