Detailed information of BRAKERYMEP00000017707.1 in Astreopora myriophthalma

Genomic Location: BLFK01000474.1:2313...5478
NR annotation: XP_029197887.1, paired amphipathic helix protein Sin3a-like isoform X2 [Acropora millepora]
Species Astreopora myriophthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q60520Paired amphipathic helix protein Sin3a OS=Mus musculus OX=10090 GN=Sin3a PE=1 SV=3
Q96ST3Paired amphipathic helix protein Sin3a OS=Homo sapiens OX=9606 GN=SIN3A PE=1 SV=2
Q09750Paired amphipathic helix protein pst1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pst1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002860 (this species only) · gene tree & orthology

 Pfam domain
No Pfam domain signature was recorded for BRAKERYMEP00000017707.1 in Astreopora myriophthalma.
 InterPro
InterPro termTypeDescriptionSource
IPR036600
all species →		Homologous_superfamilyPaired amphipathic helix superfamilyInterproscan
IPR039774
all species →		FamilyTranscriptional regulatory protein Sin3-likeInterproscan
IPR003822
all species →		RepeatPaired amphipathic helixInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12346
all species →		SIN3B-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000118
all species →		Cellular Componenthistone deacetylase complexInterproscan
GO:0000122
all species →		Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0000785
all species →		Cellular ComponentchromatinInterproscan
GO:0003714
all species →		Molecular Functiontranscription corepressor activityInterproscan
GO:0016580
all species →		Cellular Componentobsolete Sin3 complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERYMEP00000017707.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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