Genomic Location: not available for this species
NR annotation: XP_029198038.1, PAN2-PAN3 deadenylation complex catalytic subunit PAN2-like isoform X2 [Acropora millepora]
Species Astreopora myriophthalma · all data for this species · gene families
| CDS |
| BRAKERYMET00000018257 |
| Transcript |
| BRAKERYMET00000018257 |
| Protein |
| BRAKERYMEP00000018257.1 |
| UniProt accession | Description |
|---|---|
| Q5F450 | PAN2-PAN3 deadenylation complex catalytic subunit PAN2 OS=Gallus gallus OX=9031 GN=PAN2 PE=2 SV=1 |
| Q8BGF7 | PAN2-PAN3 deadenylation complex catalytic subunit Pan2 OS=Mus musculus OX=10090 GN=Pan2 PE=1 SV=1 |
| Q6IE70 | PAN2-PAN3 deadenylation complex catalytic subunit Pan2 OS=Rattus norvegicus OX=10116 GN=Pan2 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003010 (this species only) |
| Ubiquitin family | DUB|USP|USP · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13423 all species → | UCH_1 | Ubiquitin carboxyl-terminal hydrolase | Domain | Interproscan |
| PF00929 all species → | RNase_T | Exonuclease | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR050785 all species → | Family | PAN2-PAN3 complex catalytic subunit | Interproscan |
| IPR012337 all species → | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR028881 all species → | Domain | PAN2, UCH domain | Interproscan |
| IPR036397 all species → | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR013520 all species → | Domain | Exonuclease, RNase T/DNA polymerase III | Interproscan |
| IPR028889 all species → | Domain | Ubiquitin specific protease domain | Interproscan |
| IPR038765 all species → | Homologous_superfamily | Papain-like cysteine peptidase superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15728 all species → | DEADENYLATION COMPLEX CATALYTIC SUBUNIT PAN2 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000289 all species → | Biological Process | nuclear-transcribed mRNA poly(A) tail shortening | Interproscan |
| GO:0000932 all species → | Cellular Component | P-body | Interproscan |
| GO:0004535 all species → | Molecular Function | poly(A)-specific ribonuclease activity | Interproscan |
| GO:0031251 all species → | Cellular Component | PAN complex | Interproscan |
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
BRAKERYMEP00000018257.1.
