Gene detail

Detailed information of BRAKERYMEP00000018469.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_029195243.2, neurofibromin-like [Acropora millepora]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000018469

ATGACACTTGCTTCTCAGTCCAACATAATCACAATGGAAACCATTGCTAAATGTTTTGAACAGAATCCAGACAAATGTGCATCCTTGTCGGATGAAATATTGAATAAACGTCTTCTTCCAATAATTTGTCAGTTCATTACTCAGTCAAATGGATTTCCCTTGGAAGCAGAACAGAAAGCTCTGGCTGGCAGAATTCTTTCTCATGTCAGTGTGCATCACTTCTCAGCCTTATTTAATCGCATTGCAATCAGGCTACATGTTCTTGCCAACACAGAAGATAACTCTGATACCGGTGATATTGAGCTCATTCGACATTTACATGTGAATGTGTCGTCTCTCAAAATTCTTCTACAAGAGAGCATTCAAGTATTTAAATCACTGAAGAAAACTGGACAGCTAGCACTTGTGTCAGGGTTAGAAAAGGCAATATGGAACTGGGTTGAGAACAGTCCTGATGAATTTGCCCAACTACAAAGGCAACCTTTGCATGATCTGTCAGAATATGCTGAAAAGCTTTTTGATTTGGTTGATAACTTTGCTGAAAGTTCCAAAAGGAAGGCGGCAGTATGGCCTCTCCAGATAATGCTGCTTATTTTATGCCCAgaTATGCTTGAGCAAATAGCTACTAGTGAAAGAGTCCTTGACAGCTGCAAGGTCAACAAGAAAGAATTTCTTGATCACTTGAAGAAAGCCCTGACTAGCACGAAGACCCTGACTGAGAGTGCAGCTGTGGTGTGTGTCAAACTTTGTAAGGTCGCAACTTACATGAAACCAGAAGACAACTCTGTGTTGTGCTTCCTTGTTGTCACAATGCTCAATGAATTAAAGGCTCTTCTATTCAATGTCAGCAAACCATTCTCTCTGGGATCTGGAAGCTTTCTAACTACAGAAGAGCTCGTGGTTGACTGCTTTGTGTCAAGTTTCCGCATCAACTACAGAAACAACCAACACTTTGATGTCTGCCTTCAGCCAAGCTCACCCATTATTTATCATCTTGCATTTGTGAAAGGAACTTACTCCATAGTGAAAGAGGCTCCTCTTCGGTGGTGGCCAAAAGCTGAAGTACTTCATCCTAAAGCTCCAGCCATAAGACACCTCTTCTTGAGTACTTGCAGCAGGGTACAAAATGCAGAACAGGAGGGACAGCAATCAAGGCTGAGCCAGATATACAAAGTAAAGGATAAGAAGCATAAGGAAGATGAGATGCATTctaacaagaaacaagataaagAGTTGTTGCTGTGGCTGGTGAAGATTTTCCATGCTGACccaatttttgcttttcatAATCCTGATCTCCATGGCTGGGAGATTCAAAAGAATTCATCTCAAGTGATAATGGGTGTGGTAAACCTCATTTTAACCCCAACATTACCATCTAATATCAGGCATGAGGCTGCTCAGaCTCTGCTATGCTTCTTTCAGTCTGATTACATTGATATGTGGAACCCTGTAGCACCCATTGCTTCTTTCTGGGAAATCAGttcTAATGTCATGGTATCTATTGCTGAGTTTTTGATTGGACATGGCAGCCATGGAACTGTTCTTCTACGATATTTGAGGGAACTGACACTTTGCAAAAATGAATTTCTTAGAAAACACAAGgaGCAAGCTTCTATAGGCTGCCACTTACCAATCTGTACAGTTTCTCAAACTAAACTTGAGGAAGTTTTCTTAACTTTCTTATGGAGTCCCAACGTTGAAACTGTGCTGATTtcactttcttgttttggtcACATGTGCAATGAAGTGGACATTGTACTGAGCTCAGAGTCTCTCAATGAGATTCCAACTGCTCAGAACATGCATGTATACCGTGATCTCTCCGATCAGGCTACTAAATTTAGAGCCGGGAGAGCTGCATTACAAAAACGCATCATGGCTTTGTTAAGACAACTTGACAGGCAAACACCAGGAAATATGCAGGCCTGGGACAATACTTACACAAAATGGCAGAGGTTGACATATGACCTTGTGAACTTTGCTAAAGAGGAAGCATCATCTGCAATGGATGTACAAAAGTACCTTAGACGAAGATCAACATCAAAACTCACCACAGACAATTTTCAGGAGTCTTTAAATGAGTGGACATACATGACAGGGTTCCTTTGTTCCTTGGGGGGAGTGTGTTTAACATCTTTGCAATCAATCAGAAGATACAGCAGAAGTCTCCCATCTTCTGTTCACTCTGTGAGTCAAcctcagaaaacagaaaatgttaCATTAACAAAGTTTATGCAGGACTTGCTGAGCCTTCTAGTTTGCTGTAATGAAAGGACTGGTTTACAGATACGAAGTACAGTTAATGAGATGGTTGGTGGTGAGCTCAGTCAGAAACTCTACCCCATTTTACTGACACAGATTATGACAGTTGTCAGTAGCTTCTTTGCGTCATCTGGTCAGGTGGTGGTTCAAGAAAGAAACACTCTCTTTACAGAGCAGatcattgtcatcatcaaacACATCTTGGAAAATAAACTTGGACACAAGAACAGTACGCAGATGAGTGGGATTGATGCCATGATTCTATCTTTTGTCAGATATGTGAGGAACCTTCCAGTCAACCAACAGACTCTGCAGATTAAATGTAAACTCTGCCAGCTAATTGATGTGCTGATGGCAAAAAGAAATGAACTTTTACTTCATCAAGAAGTCAAGCTAAGGAACAAGCTTGTTGAATACCTCACTGACTGGGTTCTTCCATCTGCTGAACACCATCAGAGTATCCCTTCCGAGCTTTCTGTTTTGTCTAAAGAACTTGATGCTACAGTGATGCGTGCCATAGCATCACTGCTGTCAGGATTGCCTCTTCAGCCTGAGGGAACTGAGACAGACATTGTGGAAGCAAAGTCACAACTTTTTCTCAAGTACTTTACTTTGTTCATGAACTTGATGAACAATGAGAAATGCACCATACGGGCAAGGGAAAATGTGTGTTATATTGCATCACAAATACTGCACCAGAACACCGTACTGGCTATGTCAAATCTGCTGAATGCCAACATTGACACTGGGCTCATGTATGCTATAGGGCTTGGTTACCATGATGACCTGCAGACTCGAGCTGTGTTTATGGAAGTGCTGACAAAGATTCTGCAACAGGGCACTGAATTTGACAATTTGGCAGACACAGTGTTAATGGACAGGTTTGATAGACTGGTGGATTTGCTGACTCTAAAAGGAGAAGGTGGCAGGCTTCCAATTGCCATGGCCCTGGCTAGTGTAATACCTGTTCAACAAATGGATGAGTTGGCACATGTCCTTGTCACTCTGTTTGATGATAGACATATCCTTCCACAGCTACTGAAGAACCTTTTCACCACAGAGGTATACAGTGCTGAGGGAATGCAGACATTATTCCGAGGAAACAGCTTAGCAAGTAAAACCATGACTTACTGCTTCAAGGCATTCGGTGGTAATTACCTGCATACACTGTTGGGACCACTGATAGCTCCAATGTATAAAGAACTGGTCTCCCTTGAAGTTGATCCAACAAGGCTTGAAAAGGGGCAAAGTGTTGAAGAAAACAGGAACAACCTGATCAAAGTGGCGCAAAAGTTTTTCAACGAGATTATCATATCTGTTGACAGCTTCCCGATTCAGCTGAGGAATTTATGCTATTGTTTGAGAGAGGTTGTTCACCAGAGATTCCCTAAACACAGCTTGGAAGCAGTAGGCAGTGCCTTCTTTTTGAGGTTCATCAATCCAGCCATAACATCACCTCACGTGACTGGGATTATTGACGAGATTCCTTCAAAAGAGCTTAGGAGAGGACTCATGTATTTGTCCAAGATCCTCCAGAACTTAGGCAACCATGTTCTTTTTACCAAAGAAATACACATGGAACCATTCAATGGTTTTCTTCAAACCAACTTCGAGAAGGCGAGAGATTTTTTCAATACCATTTCTTCCAAGTCCCCTTCAAAAAGAGATGAAGACAGCACTAGTTATTCTTACATCAGTGACAGCAGTGTTTTAAGTCTCCATAAGCTCTTATGGGATCACCAGGAAAAAATTGGGACCTACTTAGCCACAAAGAGtgaaTTCAAGACGTTTGGGAGAAGACCATTTGAGAAAATGTCAACCCTTCTCGCTCACCTTGGCCCCCCCGATCAACAGAAAAATCATTTTTCTCATGCGCGGTGGCAAGACGGAGCAGCTCGATTTGAAGAGTTCATGGCCCGACATGCTGAGGAGAGTCGGGATGATTTGCAGGCCATCAAAAGTTTAAATGTCTTTTATCAGAGTGGAAAGTCGAAGGCAGGGAATCCCGTGTTTTACTACATCGCCAGACGATTCAGAGGAGACCAAATAAGTGACGAACTTCTCATTTACCACGCCCTGCTAACGATAGAGAGCTGTATTGAGAAGCCTTGGGAACTGGTTGTGGACTTCACGCACACCACCCTGGAGAACAGATTTAGTCCAAACACAGTTGCAAAGCTTCTGAGAGTCGCACCTGATGGTGCAGTAAAGAATCTAATGGCAGCTTACTGGTACAACTGCAGCAGCTCTTTGAGACAATACGCCAAGTACAACGAACGCAATTTGGCCCCACTCAAGGGCCGTTCCGTGGTGCGAGTTTGTGAGTCGTTAAGTAAGTTACATGAGTACATCAGCCCTGGTGAGCTCATGCTACCAAGCTCTACATTGACTCTCGAGGAGGACTTGAAGATTGGTCCCACCTCAGTTCAAATCACAACTCCTGAGCGGCACAGAGTGTTGGGTTATTCCAGTATCCTGAATGATGTGTACTACGCTTCTGAAATCAAAGGGGCCACAGTGGAGGACGAGAATCTTTGTCTCCTAAAGCTTGTGAATGTTGGTCCTGGAATTCTGTTGATGAGCAACGATACTGAGCAGATCGTACAAGCCGTCACACATGTCAAGACCAGATGGCAGCTTTCACAGCCGGATTCATCCACTGCTGCAAGTAAAAAGATCAAACCCAAAGATGTACCTGGGACACTGCTAAACATGGCGTTGCTGAACCTTGGTACTTCAGATCCCAGTCTTCGACTTGCTGCCTACAATCTGCTTTGTTCAGTCACCAAGTCTTTTAACCTGAAAATCGAAGAAAGGTTATTGGAGGGAACAGGTTTGTGCATCCCAGCGAATAATACCCTTTTTATTGTTGGAATCAGTGAAAAACTGGCAGCAAGAGAACCACAGCTTACTCTTGAGTTCCTGGAAGAGTGCATTACGGGATTTGTTAAATCTGACTACGAACTGAAGCATTTGTGTTTGGAGTACATGGCACCCTGGCTGCCAAATCTTGCAAGGTATCCTGCAGATGATCCACAGAAGGTGAAAATGACACACATTTTAGAAGAACTGATAAATCTGACTGTGAAAGAAAAAGGGGCCAGTGCTACGGGAGGTTTGGGCTCTGTGAAGGCGGAAGTTATGGCCGACACTGCAGTTGCTTTGGCATCAGCCAATGTTCAAGTTGTTTCACGCAAGGTCATCGGAAGATTAGATTCGCTCATCAGCAAGACCTTCATTTCTCCAACTGTTCGCTTGGAGCTGCACCTGATGTGGGACGACATTGCTATTCTCACAAGATATCTTCTTATGCTTTCCTTCAATGATTGTCTTGACG

Transcript

BRAKERYMET00000018469

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P97526	Neurofibromin OS=Rattus norvegicus OX=10116 GN=Nf1 PE=1 SV=1
P21359	Neurofibromin OS=Homo sapiens OX=9606 GN=NF1 PE=1 SV=2
Q04690	Neurofibromin OS=Mus musculus OX=10090 GN=Nf1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002451 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00616 all species →	RasGAP	GTPase-activator protein for Ras-like GTPase	Family	Interproscan
PF13716 all species →	CRAL_TRIO_2	Divergent CRAL/TRIO domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001936 all species →	Domain	Ras GTPase-activating domain	Interproscan
IPR001251 all species →	Domain	CRAL-TRIO lipid binding domain	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR008936 all species →	Homologous_superfamily	Rho GTPase activation protein	Interproscan
IPR036865 all species →	Homologous_superfamily	CRAL-TRIO lipid binding domain superfamily	Interproscan
IPR039360 all species →	Family	Ras GTPase-activating protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10194 all species →	RAS GTPASE-ACTIVATING PROTEINS	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0043087 all species →	Biological Process	regulation of GTPase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04728	ATM, TEL1; serine-protein kinase ATM	EC:2.7.11.1	DNA repair and recombination proteins	ko03400	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.