Gene detail

Detailed information of BRAKERYMEP00000018519.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: CAH3025029.1, unnamed protein product [Porites evermanni]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000018519

ATGGCCGAGACTCTTTTGTCCAAATGCGCTCAGTTTAGGCTAGACGAGCAGTTCATTGATGTCCGTTTGAAAGTAGGTGAAGATTACTTTCCAGCGCACCGCATTGTACTCGCGGCGAATAGCGATTACTTTTACGCGATGTTCACCAAGGGAATGAAGGAATCGAGTCAAGAATGGATTGAACTGAAAGACGAAAGCATTTCAGCAGAGTCGTTGAAGATCGTGCTGAACTCCATCTACGGTCAAGATCTTTGCGTCAACGCGCACAATGCATTGGATGTTCTCGCCGCCGCTAACCATCTTCAGTTCACAAACGTTGTCCAACAGTGTTGCGGTTTCTTGGTAAGAGAAGTCATGCAGATTCGATTTGATGTACAAAGGTATTGCCAACTTATTGACGTTGCAGAGAAACGGGGCTTGAGAGATCTACAAGAGGCCGTCCACCACAAGATGGCCTCGATGTACAAAGAAGTCTGCGACAGTGAAGAATTCCTCTCTCGGATTGATATGGATCAATTGACGAGTATTCTCAAACGAGATGACCTCTGTGCCCCTTCAGAGACGTTTGTCTTCAAATCTGTGGTACGCTGGGTGCGATATAGGAAGGAAGAGAGAATGCCAGTAGCGGCCGAAGTGATAGACGCGGTTCGTTTGGGGCTGGTTGATATTGTAGCACTGATTGAAGAACTGAACGCAGAGGATTTCCAACGAGTTCCAGAGATTCAGAAAATTCTATTTGAGGCGTCTATTTACTTCAATGCACCGTCTCAAATCTCAAAGTTTGCCAAGAAAGCATTGCCACGAGGCACTAGCTCGgttCTTGTTGCCATAAAACCGAAGTGGTCCCAACCGGAGCAGTTTAATTTTGAATCCAAACTTTGGAAGCCCTTGCCGTCCATTGCTGTGATTCCCGGTGCGGATACGTGCATCTGTACAAAGGTTGTTGGTAACAACTTGTATGTCGCTGGAAATGACACAAAGTGTAGTTACGTGTGGTGTTACAGCATCGAAAAGAATCTATGGCATAAGCTGCCACCCTTGCCAGGCCCAATTAACGTTTTGTGTGTGATGGGAGAGTTTCTTTACGCAATCAGTTCGAATCACAAGCAGATTCCCCAGCGCTACAGCTTTGCTACACGTCAGTGGCAAAGCATAGCACGAATAGCGGTAGAAAGAAGTGGTCCAGAAGAGTTTGGGTTTCCACCTTCAGTCATCTCAATGAATGGAGCAGTGGTTCTTCATTCAAAGCTCTATGTTGCGTATCAATGCCACTATACTAAGTACCTCCGCGGGCAGGTTGTAACGACTTTCAGAAGGCGATTTTATATGTATTGCTTCCACGAAGAACAGAATCAATGGCATGAACTAAGCTGGTCAGTCAGCCGTGGGCCGGGTGACCACTTCGGGTCCTGTCTTTTTGTGGTAAATAACCAAATTTGTATGGCCGGTGGTCGCAATTCAGTCAGTGAAGACACTGGTGTCCCTATGGGTGAGCCCGCGACTGTGGACGTTTATGATAAGCTAACTGACCAGTGGTCTCGCGTGGAACAAAAACATATTCCTGAAAACAACCTTGGCGCAGTGGAGGTAGACGGAAGGGTATATtttatcatcaacaaatttccaTTCGACAGTGGCATTAGAATCCCTCAAGAAGAAGTGTATCCCGTTTCCCTTGGCGAGTGGGAGAACACTGGGAAGGGTATTGAACATGCAGCATTATGTTATCTACCgctgaaagaaaacatgaaaactGGCCTTACCCAAGAAGAAACCGAAGTGTCTCGCCAGGCATACGCTGGTCTGCTGTGGAGCAAGCAGTTTTATCATTATATTATTCACGACTGGCTGATCGGTGACCCAGAAATGCCGGCTCCTCCCGGTGAAAGACTGAAAGGCCGCAACTCTGAAGCTGAGTGGAGACAGTTATTTAACCGAGACATTGTATCCATGCCCGACAAGTGGGAGTACCCTTGGTATGCCACTTGGGATTTAGCTTTCCATATGCTTCCTATGAGCAAAATAGATCCTCATTTTGCCAAGGAACAGTTGCTGTTGTTTCTCCGAGAGTGGTATATGGCTCCTAACGGTCAGCTGCCTGCATATGAGTTCGCCCTAGGTGATGTTAACCCTCCTGTTCATGCGCTTGCGTGCTTAATGGTCTACAAAATGACAGGCCGAAAAGGCTCACGGGATGACGACTTTCTGGCGCGCGTTTTCCAGAAACTGCTCATTAATTTCACGTGGTGGGTAAACAGAAAGGACCCTTCTGGTAAGAACATCTTTGGCGGTGGATTTCTTGGACTTGATAACATTGGGATTTTCGATCGGTCCAAGGATTTACCGATCCAGGCCAGTTTGTTGCAGGCTGACGGCACAGCTTGGATGGCATTCTATTGTGTAATAATGCTCAACATTGCTCTGGACCTCGCCGGAAGTGACGGGACATACGAAGACATGGCTTCCAAATTTTTTGAGCATTTCACTCAAATCTCAGACGCTATCAATCAAATGTCAGACGGAGTTGGCTTGTGGGATGAAGAGGATGGCTTCTATTATGATCATCTCAGCACAGACTCGTGCTCCTTGCCACTGCGCGTGCGCAGTATGGTTGGCCTCGTTCCCTTGATGGCCTGCCTTGTCCTTGATGACGAGAACGTCCGCAAACTCCCCGGATTCAAAAAGCGGTTAGACTGGTTTTTGTTAAACAGGAAAGACTTGGCCTCTCAGGTGTCATACATGGAAACAGGTGGTGAAAGTCAGTACCATCATTTATTAGCCATCCCCACCAAGGATCAACTTACCCGTGTGTTAAGCTACATGCTAGACGAAGAAGAATTCCTGTCTCCTTACGGGATTCGTTCCTTGTCGAAGTTTCACGAGAAGAATCCTTTTGGGCTGGAGCTGAACGGCCAACGTTTCAGTGTGCGCTATGTCCCGGGCGAGTCAGACACCTACATGTTTGGAGGCAACAGTAACTGGCGAGGACCCATCTGGGTTTGCATGAATTATCTCCTCATCGAAGCCCTTGAACGCTATGATTATTTCTTTGGCGAAGAGTTTACGATAGAGTGCCCGACCCGGTCAGGGAACCGCATGCGCCTACGCGATGTGGCCCTTGAACTGAGCAGGCGCGTGGTGTCTCTGTTTCTGGCCAATGACGAAGGAAGGAGACCATGTCACGGTACTGACGACAGATACGCATACGATGCACATTGGAACGATCTGGTGCTCTTTTACGAGTACTTCCATCCTGAAACTGGACGGGGGTGTGGTGCGAGtcacCAAACAGGATGGACAGCTCTTGTTAGTCGGCTGCTGGAGAAGCTCGCCAAAAACCGCTGA

Transcript

BRAKERYMET00000018519

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q04336	Uncharacterized protein YMR196W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YMR196W PE=1 SV=1
Q8WZ60	Kelch-like protein 6 OS=Homo sapiens OX=9606 GN=KLHL6 PE=1 SV=3
Q8BZM0	Kelch-like protein 12 OS=Mus musculus OX=10090 GN=Klhl12 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001748 (this species only)
Transcription factor family	ZBTB · all TF in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|BTB · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00651 all species →	BTB	BTB/POZ domain	Domain	Interproscan
PF07707 all species →	BACK	BTB And C-terminal Kelch	Domain	Interproscan
PF03200 all species →	Glyco_hydro_63	Glycosyl hydrolase family 63 C-terminal domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011333 all species →	Homologous_superfamily	SKP1/BTB/POZ domain superfamily	Interproscan
IPR008928 all species →	Homologous_superfamily	Six-hairpin glycosidase superfamily	Interproscan
IPR004888 all species →	Family	Glycoside hydrolase family 63	Interproscan
IPR000210 all species →	Domain	BTB/POZ domain	Interproscan
IPR015915 all species →	Homologous_superfamily	Kelch-type beta propeller	Interproscan
IPR012341 all species →	Homologous_superfamily	Six-hairpin glycosidase-like superfamily	Interproscan
IPR011705 all species →	Domain	BTB/Kelch-associated	Interproscan
IPR031335 all species →	Domain	Glycosyl hydrolase family 63, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10412 all species →	MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan
GO:0004573 all species →	Molecular Function	Glc3Man9GlcNAc2 oligosaccharide glucosidase activity	Interproscan
GO:0006487 all species →	Biological Process	protein N-linked glycosylation	Interproscan
GO:0009311 all species →	Biological Process	oligosaccharide metabolic process	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000018519.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.