Gene detail

Detailed information of BRAKERYMEP00000018569.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_015758876.1, PREDICTED: uncharacterized protein YMR196W-like [Acropora digitifera]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000018569

ATGGATGTCATTAACCAATTCTTCTTCCTCAAAAGGTCTCTGGAAAGTGGTAATCTAGCAATGTccaaggaaaattttgaaaagaaacagTCTTCGAAGCGTCGTCACTCGGTTTCAGGGTCAGACTATTCAGGAGATTTTGAGGAAGAAAAAACACGCAGGCAAGAGACGAAGAGGCCTGGGGTGCGCAGGTTGTGGGAACAGTTAAGAAACGGCTCCTCTTCCCTTAGATCTGTCGAAACTTACTTGAGCAGGCGACTCTCAAAAAAGAGTCCATTTCACAATGACGGACATCATTCTAAGATAACGAGACACAAGGTAGGTCTTTCAGAGAATGAAAGACAACCAGAGGAGTTTAAACGGCTTGAAGAAGACAAGAATGACCCTGACAAGGCGTGGAGAGAATGGGGGCCATATTTGTCTGAGAGGCAATGGGGAACAGTCCGTGAAGATTACTCTAGCGAAGGAACCTGctgGGAGTATTTCCCCCATGACCAAGCTCGATCACGTGCTTATCGCTGGGGAGAGGACGGTTTGCTAGGAATCACGGACAGGGAATGTCGGTTGTGTTTTGGTTTGGCTTTATGGAATGAGAATGATCCAATTTTGAAAGAAAGGCTCTTTGGACTTACTGGAAACGAAGGAAACCATGGTGAGGATGTAAAGGAATGCTATTACTATCTGGATTCCACTCCAACTCATTCTTACATGAAGGCTTTATACAAATACCCACAGAATGAATATCCTTATGCTAAATTGGtcagagaaaataaagaaagaaccaAACAAGACCGGGAATTTGAATTGGCTGACTCTGGAGTCTTTGAAGACGGAAGGTACTGGGACATTTTTGCAGAGTACGCTAAGAACACACCCGATGACATCCTCATTAAAATTACCGTAGCAAATCGCGGGCCTGAAGCAGCTCGGGTGCATGTGCTACCAACACTGTGGTTCCGAAACACGTGGTGTTGGGGCTGTGACCACGTAACCTGCTCGTGCATGGAGAGTTCAAATTCCAAAGGTTGTACCAGGAAGCCAAAGATGATGCAGACGGCTCCGAAACAGGTGGAATGCTGTCATGACAGTTTAGGAAACTACATTTTTACTGTGGATGCGGATCCTGATGGCCTAACACCGGAACTTATTTTTACAGAAAATGAAACTAACTCTCAGAAACTCTTCAATTCACCAACATCGTCGCAATTCACAAAAGACGCATTTCATCGTTATATCATCGACAATGAAATCGAGGCAGTCAATCCACTCAGGGAGGGCACCAAAATGGCAGCGCATTATGTTCTTACAGTCCCTCCCGGTGGACAGCAAATTATTCGTTGTCATCTTACAGCTTGGAACGATCGAATGACTTGGCTATTCGGTAACGAGGCTTTTGATGATGTCATGTCCCAGAGAAAACGCGAAACCGATGAATTTTATAGAACTCTCATACCAGAGTCGCTTTCAGATGACGAGATGACCGTTTCTCGTCAGGCCTACGCGGGATTACTGTGGAGCaaacaattttattattatgtCATCGATGAGTGGCTTAAAGGTGATCCCATCATGCCTTGCCCACCCCCCGATCGACTGAAGGGGAGGAACTCGGAATGGAAATACCTACACAACAAAGACGTGATATCCATGCCTGACAAGTGGGAATATCCTTGGTACGCCTCATGGGATTTAGCATTCCACATGCTTCCCTTCTGCAAGGTGGACCCTGAATTTGCAAAAGATCAGTTGTTACTGTTCCTTCGAGAAACGTACATGGCGCCTAATGGACAGATTCCCGCCTATGAATTTGCACTCAGTGACGTCAATCCACCCGTGCACGCTCTGGCCTGTTACCGTGTTTACGAACTCACCGGGAGGACTGGGAAGAAGGATACCGTCTTCCTGGCGAAATGTTTCCAGAAACTTCTGTTGAACTTTACTTGGTGGGTCAACAAAAAGGACCCTGagggaaaaaacatttttggtgGAGGATTTCTCGGACTTGACAACATTGGTGTATTTGACAGATCCAAACCCCTACCGCCAGGAGATCGTCTTTGCCAGGCGGACGGCACAGCATGGATGGCCTTGTATTCTGTTGTGATGCTGAACATATCTTTAGAGCTCGCTCTTACGGACGCGGCCTACGAAGACATGGCTATTAAATTTCTGGAGCATTTCACCAGTATCGCGGACGCCATTAATCAGATGTCAGATGGGTTTGGACTCTGGGACCCCGAAGACGGATTCTACTACGACCATTTTCACAGAGGACAAGATTTCTTTCCCTTGCGCGTGCGCAGCATCGTCGGTCTCATTCCCTTAGTGGCGTGTTTGGTTCTGGATGGAAAGTACCTAGACAAGCTTCCTGGTTTTAGGAAACAGTTGAACTGGTTCATGGAAAATAGGAGAGACCGAGCAGCACAAATAGCTTACTTAAATCCAAACCAAGACTCCTACCTCCTGGCAATTCCTTCCCGCGAACAGCTTCAAAGTATTTTGTCGTACATGTTAAATGAAGATGAATTCCTTTCGCCTTACGGCATCCGCTCCGTATCACGCTTTCATGAAAAGCATCCTTTCGAACTGGATCTAGACGGCAAAACGTACAAAGTGGATTATGTTCCAGGGGAATCTAACACGCACATGTTTGGCGGCAACAGCAACTGGCGGGGACCTATTTGGTATTGTGTCAATTATCTCATCGTGGAGGCCCTCAAACGTCATGACTATTTTTACGGAACCAGTTTCAAAGTTGAATGTCCAACCGGCTCTGGAAATCTCATGCGTCTTAAGGACGTTTCCCTGGAGCTCTCCCGCCGTCTAGTGTCAGTTTTTCTCCCGGACAATCTCGGCCACAGGCCTTGCCACGGAAACGAGAGGCGATACGCAACCGACGAGAACTGGAACCAACTGTTGCTGTTCTACGAGTACTTCGATCCTGAAACCGGAAGAGGATGTGGAGCAAGCCACCAAACCGGTTGGACAGCACTTGTGGCTTCTCTGCTGGATAAGATCGCAATCGCTAGGAAAAACGATGCATTGAAGAATTTCAAAAGTAACATGAATGGGATGGCAATATTGCTTGCTTGTATTTCCTTTACTTTTGCTGTGGTAACGCCAGCTTCTGTCAGTGTACGAAAGAGAAAGGTTTTAATTCTGGGGGCAGGAGCTGCCGGGATTACTGCCGCGAAAACGCTGATCGACCGAGGAATCACCGATTTTCTTGTGCTGGAGGGACAAGACTACATCGGCGGGAGGATGAAACGAGTACCGTTTGCAGGAATGAAGGTGGAGCTCGGAGCAAACTGGATCCATTTTGTAGATGAAAAAGACAACCCTCTGATTCCATTGAAGAACAAGCACAATTTGACAGGACACATATCAAACTTCAGTGATATCCGCATCAGAAATGCTCATTTCCCCGGGGAAGCTGAAGACTCAGATATGGAAGTCTTTAAAGAGTGGATGAAGAAACGTGAGGAGCTATTTGAGATGGGTGAAAAAAGAGGCCAAGAAGACATCCCACCAAGAGATATGCCGGTCTCTACTGGATTAGACATGCTTGGCTGGAGATCAGACACGCCCCTAAAAATAGTCCTTTCCTGGTTTGACATCGATTTTGAATACGGTAATAACGAATACTTGACATCTTTGAATAACATTGGTTCCCCAGGGGACGACCTGTTTATTACGGATCAAAGAGGAATATGGACTCTCTTCAGCGATTTCTATTCAAATTTTCGGGATAAAATATATTTGAACAAAACTGTGACCAAGGTTAAATATGACAGCGACGGTGTTAAAGTCACTACATCTGAGGGAGAAACATTTACTGCAGATTACGCCTTGTGCACGTTCAGCTCTGGAGTGTTGTATGGTGGTTCAGTTCATTTTGATCCCCCTTTTCCAGACTGGAAGAAAGAGGCTGTTTATCGTCTGAGACCTGTTCACCTAACGAAGATTTTTCTTAAGTTTCCGAGCGACTTCTGGGATAACAATGAGTGGATTCTTCATGTTTCGctaccctttcctgcccaaaaCTATCCAGCTTTTTTGGACCTTGATCGATCTGGATTTTTTCCTGGATCGACCACTTTGTTTGCCGCGGTAACAGGATATCAAGCATTGATGGTGGAATGGCAAAATGATAACCAAACTATGGAGCAAATGATGCAAGTTCTACGGAGCATCTATGGATGGAACATTCCAAATGCTACGGaCATTGTAGTGAGTAGATGGTCAAGAAACCCTTACACCCAAGGTTCCTGGACAGACCCAGTAGTTGGAACAGATTCGTCCGTCTTCGCTAATATGGCCGGTCGACTGAACAATTTGTTTTTCGCTGGTGAAGCTACCCATGCAGACTGGTATGGTTACATACAGGGAGCTTACTTCAGTGGACGCGATAGAGCCAATGAGATTGCAAGTTGCATTCAGGGAGATAAGTGTGAGCCatatcagccaatcacaagcttACCGGTGATCAAGGATTGCAACAGCAGGGCTTCCCAGAAGGCAATGGTGCCTATCATTTCCCTTGCTTGTCTCCATCTCTTCTTCGTTTGTTTCTAG

Transcript

BRAKERYMET00000018569

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q04336	Uncharacterized protein YMR196W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YMR196W PE=1 SV=1
O64411	Polyamine oxidase 1 OS=Zea mays OX=4577 GN=MPAO1 PE=1 SV=1
Q0J290	Polyamine oxidase 7 OS=Oryza sativa subsp. japonica OX=39947 GN=PAO7 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001748 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01593 all species →	Amino_oxidase	Flavin containing amine oxidoreductase	Domain	Interproscan
PF03200 all species →	Glyco_hydro_63	Glycosyl hydrolase family 63 C-terminal domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002937 all species →	Domain	Amine oxidase	Interproscan
IPR012341 all species →	Homologous_superfamily	Six-hairpin glycosidase-like superfamily	Interproscan
IPR036188 all species →	Homologous_superfamily	FAD/NAD(P)-binding domain superfamily	Interproscan
IPR031335 all species →	Domain	Glycosyl hydrolase family 63, C-terminal	Interproscan
IPR008928 all species →	Homologous_superfamily	Six-hairpin glycosidase superfamily	Interproscan
IPR004888 all species →	Family	Glycoside hydrolase family 63	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10412 all species →	MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan
GO:0004573 all species →	Molecular Function	Glc3Man9GlcNAc2 oligosaccharide glucosidase activity	Interproscan
GO:0006487 all species →	Biological Process	protein N-linked glycosylation	Interproscan
GO:0009311 all species →	Biological Process	oligosaccharide metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000018569.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.