Gene detail

Detailed information of BRAKERYMEP00000018663.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_029195178.2, probable pyridoxal 5'-phosphate synthase subunit PDX2 [Acropora millepora]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q54J48	Probable pyridoxal 5'-phosphate synthase subunit pdx2 OS=Dictyostelium discoideum OX=44689 GN=pdx2 PE=1 SV=1
Q8LAD0	Probable pyridoxal 5'-phosphate synthase subunit PDX2 OS=Arabidopsis thaliana OX=3702 GN=PDX2 PE=1 SV=1
B6YVQ8	Pyridoxal 5'-phosphate synthase subunit PdxT OS=Thermococcus onnurineus (strain NA1) OX=523850 GN=pdxT PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009006 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01174 all species →	SNO	SNO glutamine amidotransferase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002161 all species →	Family	Pyridoxal 5'-phosphate synthase subunit PdxT/SNO	Interproscan
IPR029062 all species →	Homologous_superfamily	Class I glutamine amidotransferase-like	Interproscan
IPR021196 all species →	Conserved_site	PdxT/SNO family, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31559 all species →	PYRIDOXAL 5'-PHOSPHATE SYNTHASE SUBUNIT SNO	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004359 all species →	Molecular Function	glutaminase activity	Interproscan
GO:0042819 all species →	Biological Process	vitamin B6 biosynthetic process	Interproscan
GO:0042823 all species →	Biological Process	pyridoxal phosphate biosynthetic process	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0008614 all species →	Biological Process	pyridoxine metabolic process	Interproscan
GO:1903600 all species →	Cellular Component	glutaminase complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08681	pdxT, pdx2; pyridoxal 5'-phosphate synthase pdxT subunit	EC:4.3.3.6	Vitamin B6 metabolism	ko00750	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.