Gene detail

Detailed information of BRAKERYMEP00000018820.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_029189369.1, ras-related protein Rab-38-like isoform X1 [Acropora millepora]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q55E31	Ras-related protein Rab-32B OS=Dictyostelium discoideum OX=44689 GN=rab32B PE=3 SV=1
Q8QZZ8	Ras-related protein Rab-38 OS=Mus musculus OX=10090 GN=Rab38 PE=1 SV=1
P57729	Ras-related protein Rab-38 OS=Homo sapiens OX=9606 GN=RAB38 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001285 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00071 all species →	Ras	Ras family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005225 all species →	Domain	Small GTP-binding protein domain	Interproscan
IPR030697 all species →	Family	Ras-related protein Rab29/Rab38/Rab32	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001806 all species →	Family	Small GTPase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47981 all species →	RAB FAMILY	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005764 all species →	Cellular Component	lysosome	Interproscan
GO:0005770 all species →	Cellular Component	late endosome	Interproscan
GO:0008333 all species →	Biological Process	endosome to lysosome transport	Interproscan
GO:0045335 all species →	Cellular Component	phagocytic vesicle	Interproscan
GO:0090385 all species →	Biological Process	phagosome-lysosome fusion	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005794 all species →	Cellular Component	Golgi apparatus	Interproscan
GO:0005802 all species →	Cellular Component	trans-Golgi network	Interproscan
GO:0016192 all species →	Biological Process	vesicle-mediated transport	Interproscan
GO:0031982 all species →	Cellular Component	vesicle	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000018820.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.