Gene detail

Detailed information of BRAKERYMEP00000019406.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_020625063.1, ankyrin-1-like [Orbicella faveolata]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000019406

ATGATGGAGGAAAGTACACCGAAAGAAACCATCACTGAATTTCTAACTGCTGCACGACAGGGACACGAAGAAAAACTCAGGAAACTGCTTACAGAAGCCCCCAATCTTGTAAACTGTTCCAATGACCAAGGACAAACGGCCTTGATGTTTGCGAGTACATGTAATAATGTGAAGTGCTGCGAGGTTTTGTTCGAGTCAAATGTCGATGTAAACAAAGTAGATTGTGCTGGTAATTCGCCTCTGCACTTTGCTCGCAACATCACTATAATTGAAGAACTTGTTAAACGAGGAGCCAGTGTATCCTGTAACAATGCTTTAGGTCGTTCACCTTTGCATGAAGCCTGCGTTTGGGGCGAAATGCAGGTATTTGAAAAACTGCTATCCAAGTTTTGTGGCAGAAATATTTCCGAAGTAAGAGataacgaaggaacaacgctTCTTCACTTGGCAACTATTTCCAGGATTGAGGAAAGTAGGATTGACAAAATCAACTTACTGCTGCCCCTAGGAGCTGACGTAAATGAAGTAAACTTATGTGGAAGGCCAGCGATTGTCATGGCATGCAAGAATAGTGATGAAAGCGTGGCAAGACATCTTGTTCAACATGGGGCAGACCCTAATCTGTCTGACTTCTTTGGCCATAATGCTCTACATTCCTGCTTCCTGCATTACCCACTAGGACTGGTAGACTTTGGTGTTTTGAGGCCGATAAGTGGTTTACTGAAGCTATTAGCTCCTTTAATGGCGGATGTAAACGTAGCTACCGCCACAGGAATGACAGCCTTACACCTTGCTGCCCAGAGAGGCAATGCAGATGACATCCGCATCATTCTTGAGGCTGGGGCAAATCCTCTAACTCGTGACAATCTTGGGAGGACACCTCTACATTTCAGCATGTTTAACCCTTTCCCTGAGGTTTTCCAACTAATGTTTGACTACTGTGAGAAAAAGCCAGAATCCCTTCCGACTGATGGTCTTGGAAGATCCGTGCTCCATTATGCTGCCGGATGTGCCACACCCGAAATGTTTGATGCAACTATGACATGCATAACTGAATCCTATCAACTGGAATCTGAGATAAATTTGCAAGATGGGTATGGTAAGTCACCACTTCATTATTTCTTCATGCATGCAAGAAGAGAGGAGATTGTCCTTAAAAGCCTTCTACAAAATGGCTCCAAAGTTGATGGCCTTCCAGCAGCAGCAATGGCTGCTCACTCAACACTACTAAAAAAGTCCCCAGAAGAAAAGGGTGCTGTTGAAACAACCAACTTGAATTTTCGAGAAAATTTATCATCAACTTGTCTTCAAGAAATCAATGTGACAGATACTGAAAGTGTTGATCCGGCAAATCTACGACCTattgcagacaacaaagaatttCTTGAACAAGTGGCTTTGCTAACAAGTGAAAGCAAAGATCATGAAAAGATCAGAGAACGACTGAATTTATCTTGTGAAACATTTATTACAGCCCTGAGTCGAGAGGTTGAGAAACGAGATCCTCGTTTCGCATTTGATGTCATTCGAAGTGGCAGCAGCTATGAAGACACGAAACTAACAACAGATGATTCCTTCTCGGATTTTGATTACATGACTGTATTAACCTTCTTCAACAAGTTAGTGACAGCTGTTGAATCAGTTGAATTTCCCACAGGTTACATCATGCTCAAGTTTGTCAAACATCCAGAGATCACAACTGATTTAGATTTTAATGAGTTCTTTCATGATGGATATTTGATCGGACAAAAGGTTTCCAAACGTCTTTGTCAACTTATTCTTGAAGTTCTTAACGAGTCAACTATTTGGAAGGAAAATGCCCATATGTATTTCCTTGATAGAGATCAAGTATGCACATGGGAGGATGGAAGCCCAGCAATCAAGCTCAAACTGAGATGGACAGAGGGTATGACCATGCCCTCTAAGGGCATATGTTGTGATGTAGTTCCATCTTTGCATATTCCTGGATGGTGGCCTTCTTTTGCTCGTGAGGCATCAGTTGTGTTGAATCCCAACGTTAAAGCTGGGTGTTATGTTGTTTTGAAACAGCCCGACGTTCCTTCCTATGGGGTTGCTAAATTTGGGAATCCAGAGTCTTTTTTGAGAGTGTCCTTTTCTCCAGcagaattagaaattttcagaAATGCGTCTGAGGGTGTGCGAAAGAGTTTTGTTGTTGCCAAAGCACTGTCGAAGAGAGTTGTCAAAGTTCCAGGCAAACTTCTTGACTGGCCCGTGAAAGGTCGAGTACAAATTTTGAGTGCATCTTTGATTTCTACTTACTTGTTGAAGAATGCTTTGTTTCATACATTGGAATGCTTCTTGGAAGAAAGTGCTCAAGATCAAGACCAACTGGAGTACCTGGTCTGTGGGGTTTTCAAAAGGTTGTTTGAGTACACAAAACACAACTACTTTCCAGCCTTCTTTGTACCACAGCAAGATCTCATTGACAGTCATAGAACAGACAATACCCGAACAAATTTGAGATTTGTTGCCTGTCAAGCTTTGTACTACAGTGTAGACAAGAAAGGACGGAAGCATAGTTTTGAGAAGATTAAGCTCACGCTCCCAGCTGAAGCGGGAAAAGTGTATGAGAAGCTGCACTATGGTGACAAAAGCACAAGATATATTCTACAGGGAAATGAAGCAAGCTTGTGA

Transcript

BRAKERYMET00000019406

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5E9N5	Mitochondrial disaggregase OS=Bos taurus OX=9913 GN=CLPB PE=2 SV=1
Q9H078	Mitochondrial disaggregase OS=Homo sapiens OX=9606 GN=CLPB PE=1 SV=1
P83757	NF-kappa-B inhibitor cactus OS=Drosophila yakuba OX=7245 GN=cact PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0011543 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03281 all species →	Mab-21	Mab-21 protein nucleotidyltransferase domain	Domain	Interproscan
PF12796 all species →	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF20266 all species →	Mab-21_C	Mab-21 protein HhH/H2TH-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR046903 all species →	Domain	Mab-21-like, nucleotidyltransferase domain	Interproscan
IPR050745 all species →	Family	Multifunctional regulatory proteins	Interproscan
IPR006594 all species →	Conserved_site	LIS1 homology motif	Interproscan
IPR046906 all species →	Domain	Mab-21-like, HhH/H2TH-like domain	Interproscan
IPR024810 all species →	Family	MAB21L/Cyclic GMP-AMP synthase-like receptor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24189 all species →	MYOTROPHIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000019406.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.