Detailed information of BRAKERYMEP00000019487.1 in Astreopora myriophthalma

Genomic Location: BLFK01000531.1:1387332...1410173
NR annotation: XP_022795939.1, neurogenic locus notch homolog protein 1-like isoform X5 [Stylophora pistillata]
Species Astreopora myriophthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P25291Pancreatic secretory granule membrane major glycoprotein GP2 OS=Canis lupus familiaris OX=9615 GN=GP2 PE=1 SV=1
Q8R4V5Oncoprotein-induced transcript 3 protein OS=Mus musculus OX=10090 GN=Oit3 PE=2 SV=2
Q91X17Uromodulin OS=Mus musculus OX=10090 GN=Umod PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000028 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008
all species →		EGFEGF-like domainDomainInterproscan
PF07645
all species →		EGF_CACalcium-binding EGF domainDomainInterproscan
PF12661
all species →		hEGFHuman growth factor-like EGFDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000152
all species →		PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR009030
all species →		Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR018097
all species →		Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR049883
all species →		DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR013032
all species →		Conserved_siteEGF-like, conserved siteInterproscan
IPR001881
all species →		DomainEGF-like calcium-binding domainInterproscan
IPR051355
all species →		FamilyNotch and Slit guidance proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45836
all species →		SLIT HOMOLOGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0007219
all species →		Biological ProcessNotch signaling pathwayInterproscan
GO:0007411
all species →		Biological Processaxon guidanceInterproscan
GO:0009986
all species →		Cellular Componentcell surfaceInterproscan
GO:0043235
all species →		Cellular Componentreceptor complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERYMEP00000019487.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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