Gene detail

Detailed information of BRAKERYMEP00000020065.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_029205634.2, uncharacterized protein LOC114969477 isoform X1 [Acropora millepora]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000020065

ATGGCCGCGTCACTTTTTGCAATATTTTGCTCTTTCCTCAGTGTTGGTAATGTTGTTCTTTTGTTGATACTGTTGTTCCTCCTACATTACATGACCGTGTTGTACGAGTTCAGGGACATGCCACCGGGACCACGTTTCACGTGCGTCCCAGTCTTTGGGAACATCTATTCCCTCGACTCAAGAGCAGAGAAACTTACTGACTGCTTCAAAAGTCTTAAGAAAAGCTACGGTGGAATTTTCTCGATAAAACTTGGAAGCTTCAAAGTCGTCATGGCGTCGACCCCTGAGGCAGTGAAAGACGTGCTGATCACCAAGTCTCTTGATTATGCGGGAAGACCTCAAACACACGCCTTTTATAACCTTACATTAGggAATCAAGGACACCACACGGATTTTGGGAAAATGCAAGTTACAACGGCAATTGGACTGCTGATTGTAGCCCACTGTATCCAGGGGCTTTTAGGTATTCCAGTTGACAGAGAACTTTTACGAGTAAAGAGAAAAGGGGAGGTAGAAAGTGATCACGATTTAAAACTTGTGCGCAAAGTACGCAGATTACTGGAGGACAGAGAAACTGAATTACGGCACAAAAGACGCTTCTTCGCGCCAGATGTAACCGAGACTAAACCACAGGAAGGTTACAAAAGCAAAATGGAAGCAAGGTCGTCCCGTTCAGCACGTGAAGATAATGATATCACAGCGGGACGATCGGAAAGGTTTAGATTCAGAATCCGTAAAAGAAGTTCAGGTGAAGACGGAAGTGAGTCAATCCTAGGGGATACTTCCGGTTCAGGCGAACAGCCAGGAAAGAGTTCAGCTTCCGGTGCTGGAATATGGAGTTCTAAATCCAGTTTTCCAGACGTATTATCAAAGCGAGATGACAAGCGCAGTATGAGCACAAACTCACTGAATAGTCTGATATCAGCCTTGAAAGTGATCAGTTCTCTTGCGCCTGAGGAACCGGACACTTCCGCTAAGGACATAGAGCTTTCCGGTTCCGGTTTCTTTCTCGCACCGGAAAAAGAAGTGGAAGATGAAAAACTGCCAAAGTTTTTCGGAGAGGAAGGAAGCTCGGGTAGCGGAGAAAATCCCGAAGAAGCTCTAAACAGGATAAATGAAGCtgcacaaaatattttcaacgAAAAATTGGAGCATCAGAGTGAAACAGAATCAGCGCTCCTTCGAGAAGAGACCGGAAAGAGAACTGGTCAGAACTTGTCGAAAAGAGAGCTACAGCGCAATTCATTAGCGGATGACTTACTGGCAGCTGTAGAGAATGAAAAGGATAGCTCTGATCCTGAAGGGGATGAGCTAGCTTCATATTCCGGATCTGCACTGCGAGAAAACGAAGGTAAAGATGAAGAAATAACAGACAAAGGGTCAACCGCAAAACAGCTCAAAGAAGTAACGGAAGTACCAGCGGCACCGGAAGTTACAAAAACACCGGAAGTGGAGACTAGACAGTCATTAACGGATCTTCTTCTGCCGGACTCGTTCTATCGCGCCAGAAGATCGTCgcaagaaaatttctttttgcgTTCAGATAGAAACCTTGGTGAAAACGACGCACTAGATGGTGAGAGTCTTGTAGCGCGGTTTTACCGCGACCAAGACGCACAAGCCGAAGCACCAGATGCCTCTGAATTTTCGTTGGCATCCCTTCCTAGCGAGACCCAAGCTGTTTTCAGTGCCGAGGAACAACCAAATCCTGAAAAACGAGAAACACACTACGGTCACTCAGGTGACTTCGCAGAACCACGCGTGGTATTCACGCGCGAAATTAGGAACGCCCTGGAGCCAATCATTGAACGTCCAGCGGTTTACTCACGGAGCGCAGACGAGAGTGAGATGGATTCGAGTTACGGGGGTGAAGATGACGATGAAGCCACACTCACAATTCACGAAAGAGAGATCAGAGAAGACGGATACGTTGGTTGTTTCGAAGACAAATCCCCGGACCGCGACCTTCCTAGAGTGCTGTCTGTTCCCCACCTTACGCCCGACTCCTGTCGCACTGCATGCCAGAACGCCGGTCACGCTTATGCCGGAGTGCAGTATGGGTACTTGTGCCGATGCGGTGATACGTACGGCAAGTATGCCAAAGTTCCGGATGAAGACTGCAACGCATTGTGCACTGGAGACAAGGCGCAGAAATGCGGAGGTTTCTGGAAAAGCGCAGTATTTACAACAGCGGGAGCGATGCAACCATCTAAGCGCGGTAACTTCTTCCACATTGACAGTGTTCAGCCCATAACAGAAGACATATTTGACGTGCCTCGCAGTGACATCCCATCAGGTGAAGACGAGACCCGCGAGATCTTTACACTGACAGAATCTGCGAAAATGACTAATTCTGCGTCGCCAACTCCTAAGGAACCACCCCCGATACCGGCCGCTACCACATCCGAATCGTCGGGTGCATATATAAAGGAAATACACCGCGAAACGTCCTTTGAAGAATCTCCGGTGTCAGATATCCCCGGGGTGACTGTCCAAGAGTCCACGATTCCATCAAATCCTGATCATATCCTGAAAGGAGGCGATACCACAGACGCTCTTCCATCTCAACCCACACAAGCCAAAGAAGACGTTTCTATTGTGCAAACGTCGGCTGAAGAGCCTCTGCACGCAAACGAAGACAGTGATACTACACAAAATCCGGATTCTGAGTCCGCTGGTACACCTTCCCCTGGTTCAGAGGTCGCGTTGTCGCCTTTAGCGACAAAGCAAAACTTTAAGTCTGCGTCCGACGATCAGCTGACACCGCAACAGACTACAGTGCCTTTAAACTCACCAGCTAATCAGCCAGCAAGGTTTGCTCAAACACAGCACGACCAGACCCCACAAGGGACTCACGTGAGTCAGTTTATGTACTTACATCACCAGCAAGACATTCTATCCAAACCAACTCCAAAAGCAATCGTCGCAGTGCCTCCTGGGAATGTTGAAGCAGGAACTGTGGCATACACGGGAACAATAAAGCTAAAGCAGAGCTGGTTGGATCAGTTTGATGATGGGGAAAGCGCGGAGTCCAAAATACTATCGGGGAATATTGAACAAGCGTTTAAGCAAGCTTTCAAAGACGAGCCAAAGTTTCTCAACGCAGAGATCGTAGGATTCAGAGAGGGTCTGGTAAAACACAACCCCAACACGATAAGGAAAGTCATTGTGCCATTCATCCTCACGTTTAAAAATGGCGTCAAAGGGATtgaaaacaaactgaagaaCAAGGTGACGAGGAACGGAAAACTTGACGACATGCCAGTCTACAAGGATTCACTCCAGATTTCTGAGTATGGACATTCACCGGTGGCGGAAAAAGCGAAAACAGGTAAAACAGACAACAACACAGTCAAGGAAAAACACAATGGAGAAGGTGCGAAGAGAAGTGCTGTGACCGTTCCAAaaaAGCCATACACTATACAGCTGTTTCTGATGAACGACTTAtttggaaagaagaaaagaagggcTCTGGAATATAGGGAATAA

Transcript

BRAKERYMET00000020065

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9SP06	(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Papaver somniferum OX=3469 GN=CYP80B3 PE=1 SV=1
P05182	Cytochrome P450 2E1 OS=Rattus norvegicus OX=10116 GN=Cyp2e1 PE=1 SV=4
P37119	Cytochrome P450 71A3 (Fragment) OS=Solanum melongena OX=223891 GN=CYP71A3 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005256 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01822 all species →	WSC	WSC domain	Domain	Interproscan
PF00067 all species →	p450	Cytochrome P450	Domain	Interproscan
PF01390 all species →	SEA	SEA domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002889 all species →	Domain	Carbohydrate-binding WSC	Interproscan
IPR036396 all species →	Homologous_superfamily	Cytochrome P450 superfamily	Interproscan
IPR000082 all species →	Domain	SEA domain	Interproscan
IPR001128 all species →	Family	Cytochrome P450	Interproscan
IPR051836 all species →	Family	Kremen receptor	Interproscan
IPR002401 all species →	Family	Cytochrome P450, E-class, group I	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24269 all species →	KREMEN PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004497 all species →	Molecular Function	monooxygenase activity	Interproscan
GO:0005506 all species →	Molecular Function	iron ion binding	Interproscan
GO:0016705 all species →	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0020037 all species →	Molecular Function	heme binding	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000020065.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.