Gene detail

Detailed information of BRAKERYMEP00000021017.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: CAH3123262.1, unnamed protein product [Porites lobata]
Species abbreviation AMYRI · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9LEM9	Acyl-lipid (9-3)-desaturase OS=Ceratodon purpureus OX=3225 PE=1 SV=1
Q9LEN0	Bifunctional delta 6-fatty acyl acetylenase/desaturase OS=Ceratodon purpureus OX=3225 PE=1 SV=1
Q9ZNW2	Acyl-lipid (9-3)-desaturase OS=Physcomitrium patens OX=3218 GN=DES6 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004190 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00487 all species →	FA_desaturase	Fatty acid desaturase	Domain	Interproscan
PF00173 all species →	Cyt-b5	Cytochrome b5-like Heme/Steroid binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036400 all species →	Homologous_superfamily	Cytochrome b5-like heme/steroid binding domain superfamily	Interproscan
IPR012171 all species →	Family	Fatty acid desaturase	Interproscan
IPR005804 all species →	Domain	Fatty acid desaturase domain	Interproscan
IPR001199 all species →	Domain	Cytochrome b5-like heme/steroid binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19353 all species →	FATTY ACID DESATURASE 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0006629 all species →	Biological Process	lipid metabolic process	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016717 all species →	Molecular Function	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K21737	ACET6, DES6; acyl-lipid Delta6-acetylenase / acyl-lipid (9-3)-desaturase	EC:1.14.19.38 EC:1.14.19.47	Enzymes with EC numbers	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.