Gene detail

Detailed information of BRAKERYMEP00000021294.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_029203750.2, hyaluronan-mediated motility receptor-like isoform X2 [Acropora millepora]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000021294

ATGTTTCCTAAATCCAAAAGATTTCAAGATCCAGTCCCCCAGGCACCGCCTGTTGGTTCTTATGATGTCAAAAATGAGAAGCACGGAGGAGCCCTTGGGTTTGGGAAGGGAAAGCGCTTTGCAGAGCTGAAAGATATCAGTTCCTGTAGTACGTCAAGTCGGAATGACAGCAAGTGCTCACAATTTGCAACCCCTCTACCACTACGAAAGAGCAGGAAGAATCTACCTATGTCTTCATCCACTCCAAATCCGAAGGAGGAGCCAGCTCCAGAAAGTGAGATCTCAAAGCTTTTATCTGAGAGAACAGACCTTGAAAACAGACTTTGCATGAGTCAACAGGAGGTCCAAGATCTGGAATACCAATTTCAGTTACTGTTGCAAGAAAAAGTTAGCCACGAATCAGCCATTACTGGTCTTCGAAAAGAAGTACAAGACTTGAGTGAGGAAAAAGACCTGTTGCTTGCAAAAGTACAAgaaaactcaaCTGCAAATAGTGACCTCGCAACTCTGgaagaagaaatgaaaaccGTCAAGTCACAACTGCATGACAAGGAAGGGGTAGTTTCCTCGCTCAAATTGCAACTTAGTTGCGCGGTTCAAAATTCCAAAGCCGATCTTGAGCTGGaacaggagaaaaacaaggctcTGAATGAGAGAATCACGTCCTTAGAAAGAACAGTCTTACAAATATCAAAAGACAGAGATGAAGTAGATGAAGCAAACCAAAGACTTCACGAATTGGTGTCGCAACTGCGAAATGAAAATATCCAGCTGCGAGAAAAACTTGAAGAGACAGAGGTGCAGTTAGAGGATATTCGGATGAAATTTGCGACAACTTTAGGAGAAAGCGAAAACAAGATCCACGCACTCGAAGAGATGTTGAGCAAGGAAATGGTGAGAAGCAGGGAATTTGGGGACCAACTTGAGAGTTCTTTGAAgcaaagtgcagagaattatcaCGAAGCTGAAGCCAGAATTTCACAGCTTCAAGAAACTAATGAAGACTTAAAAAGCAGGAACCGGGATTTGGAAGATAAAATGTTGGAACTGATTGAAAGAGAGCAGCGggcagaagaaaaagaaagGTCTTCATCAGCGGAGAACTTGTCCTTGCAAAGCAGACTTGCGAAATGTGAAAGCGATTATGAACAGCGCCTGTCCATTGCCAATGATCAAGTGGAATCGTTGCAACAAGAGCTTCAAAGGAGTGAAGATGTGATGACACAGAATTTGAGATCACTGACAGAAAAATATCAAGACTTGGAGGACTCCTACACTTGCTTCCGGTCAGAAGTGCAAAAGGAGAAGGAATTGATTTTAGCAGAATTAGAGGTCACGAAAGATTCGCTCCAGAAAAGCCGAAGGGAGAGCGAACAGCAACAAGACACTTGTGTGTTTCTGAAAAGGCAAGGCGAAGAGCTGCAAAACGAATACGACGAACTACATGAAAAGCTTCAGAACTCGAAGACTAAAGTAGAATCACTGAGGGAGAAACTGTCAAAGCGTCAAGAGGACGTCGATTCAGCAAAGGCCGAGGTGAAAGCTGTGCGTGAAGAGTTAGAAAAACATCTGGAAGAATCAGATTCGACTAAAGTCTCTCTCAGAAAGGCGTTAGACGAGGCCCACGACACAATCAGCGATCTTCATCAGAGAGAGGAGAGGTTGTCTGAGGAATTGCAGTGTGTGCTCGGATATCAAGCAGAAGTCAACGCATTAGAGGAGAAGTTGAGGGAAACCGAAGACGAAGTCGCTAGGCAAATGAAGGCATTTGAAGAGAAATCTTCCAAATCGAAAGAGGAGTTTGGAAGGCGCCTCATAGAGACCCAAAAGAAGTTGACGCAAACGGAAATAAACTTTGAGAAATTCAGAAGCGAGCAAGAAATGAAAAGGAACGAGACCAACAAGGAAATGGAAAGtaaaTCCAGCAGTGAAGATCAGTTAAACGAATACAAGGCTCAAATTGAGATGTGGCAAACTAAATACGAAGAGCTTTGGGAAAAGATTGAGCCTTTTAAGGATCAGCTGGATGAATACGAAGCTGAAAAGAGGGCTCTTTTATGTCAAAACAGTCAAGCTAAAGATGAGGTTGCCAAACTTGGACAGCAATACGCCAAGTTGTTAGGACACcagaacaagaaacaaaaaatccaCCACGTCATTAAGCTCAAGGAGGAAAATATAGCTCTTAAAAGCGAAGTAACGAAACTTCGAGAGCAAGCTGACAAACAAAAGAGGGCCATGAGGAAGTTAGAAGGGAAAGTTGATGAGGCGGCTGGAAAGAAGAGATTCAATCCTGCCGAGGCTTTCGCGCACGCCAAGAAGGAAAACATGCCTCTAACAGTTCTTTCAAATGGTAAGTAG

Transcript

BRAKERYMET00000021294

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q00547	Hyaluronan mediated motility receptor OS=Mus musculus OX=10090 GN=Hmmr PE=1 SV=4
O75330	Hyaluronan mediated motility receptor OS=Homo sapiens OX=9606 GN=HMMR PE=1 SV=2
P97779	Hyaluronan-mediated motility receptor OS=Rattus norvegicus OX=10116 GN=Hmmr PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004159 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15905 all species →	HMMR_N	Hyaluronan mediated motility receptor N-terminal	Coiled-coil	Interproscan
PF15908 all species →	HMMR_C	Hyaluronan mediated motility receptor C-terminal	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR031794 all species →	Domain	Hyaluronan-mediated motility receptor, C-terminal	Interproscan
IPR026203 all species →	Family	Intracellular hyaluronic acid binding protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18956 all species →	HYALURONAN MEDIATED MOTILITY RECEPTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005540 all species →	Molecular Function	hyaluronic acid binding	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06267	HMMR, RHAMM, CD168; hyaluronan-mediated motility receptor	-	Glycosaminoglycan binding proteins	ko00536	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.