Genomic Location: BLFK01000605.1:277726...280200
NR annotation: XP_029198972.2, potassium channel subfamily K member 3-like [Acropora millepora]
Species Astreopora myriophthalma · all data for this species · gene families
| CDS |
| BRAKERYMET00000021533 |
| Transcript |
| BRAKERYMET00000021533 |
| Protein |
| BRAKERYMEP00000021533.1 |
| UniProt accession | Description |
|---|---|
| O17185 | Two pore potassium channel protein sup-9 OS=Caenorhabditis elegans OX=6239 GN=sup-9 PE=1 SV=2 |
| O35111 | Potassium channel subfamily K member 3 OS=Mus musculus OX=10090 GN=Kcnk3 PE=1 SV=2 |
| O54912 | Potassium channel subfamily K member 3 OS=Rattus norvegicus OX=10116 GN=Kcnk3 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000112 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF07885 all species → | Ion_trans_2 | Ion channel | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013099 all species → | Domain | Potassium channel domain | Interproscan |
| IPR003280 all species → | Family | Two pore domain potassium channel | Interproscan |
| IPR003092 all species → | Family | Two pore domain potassium channel, TASK family | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11003 all species → | POTASSIUM CHANNEL, SUBFAMILY K | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005267 all species → | Molecular Function | potassium channel activity | Interproscan |
| GO:0005887 all species → | Cellular Component | plasma membrane | Interproscan |
| GO:0015271 all species → | Molecular Function | outward rectifier potassium channel activity | Interproscan |
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
| GO:0022841 all species → | Molecular Function | potassium ion leak channel activity | Interproscan |
| GO:0030322 all species → | Biological Process | stabilization of membrane potential | Interproscan |
| GO:0071805 all species → | Biological Process | potassium ion transmembrane transport | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K04919 | KCNK9, K2P9.1; potassium channel subfamily K member 9 | - | Ion channels | ko04040 | deepkoala |
Genes whose expression across the transcriptome samples of Astreopora myriophthalma tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.
No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.
Whether this gene can be visualised in the single-cell atlases of Astreopora myriophthalma, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.
No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.
Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.
No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.
Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.
| Analysis | What it does | Status | |
|---|---|---|---|
| Primer design | Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed. | template found | open → |
| BLAST | Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start. | template found | open → |
| Expression heatmap | Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it. | no expression matrix | – |
| Gene family / orthogroup | Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue. | open → | |
| Gene set analysis | Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it. | open → |
