Gene detail

Detailed information of BRAKERYMEP00000021813.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_015768625.1, PREDICTED: uncharacterized protein LOC107347241 [Acropora digitifera]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000021813

ATGGTAAGGAAACCAGTCCACATGATTAAACCAAGAGGTGCAgctcttcaaaaatcccagcacAATCCACAGGAAAGGAGACAAGGTTTGAAGGAaacaaattctcatgcaaaccTGGCAAAGAGTAATCTCGTGCAATATGAAAGTTTTGCCAAGAAACATGGGAGAGGTCCGGAGAGAAGCATGCAGCAGTTGAGTTTAAAAGAGCTTAATCCTCAAGACAAAAAACGTGTGGCTAATTTGGTCAAAGAACTTGCCAAGGTTGGAGAGGAGCGAGTTAATGCTGAGGAGAGGCTGCAAGCAGAAAGGACAGCATTTGAAGAAAGACTTGTCATCCTACATGAGGAGTATGATGCTGTCATTAAAGAAAAGCAATATTTGCAAAAGAGGTTTCTAGAATTACAAGCCCTTCTGGTGAAGTATCAAGCAAATGGAAAAACTCCACCCTCCAAATTAGTGAAAGGTTCGCGTaatgaagacaaagaaaatgttcagGTATCAAGTGAACTTTCATCATCTGCAGTCAAGCCTGTCTCACCTCTCAAATCTGCACTCACAGAAAGTCCAGCAAACACAAAGCCTGGTAACTCAGGCTCAGTGACTAGCACTTCCAGTGAAACATTCACAAAACAGGCAGAATTGCAACCACAGGTCGTTTTTTCACTGACAGAAGAGAGGAATGGTTTACTGGAACCATTAGAGGACAGGGGACAGCTTAGAAATGAGAAGAGACCATCCTTTGTCAACACTTCTGTTTCTTCAAGTAAGACAGGAGAGTATTTTCTTGATAAAGTGAACTCATCATCATATCAAGACAAACATGCATTGCCTGGCATTATCACTGGACCCAGTCTCCCTGTAGCTTTACCATTTGAGGCTCAGGAAATTCCCTGGAGCTCAAATTTGAGAGAAGACACTCCTCCCATTTCCATGAATCCACAAGAAGCAAGAGTAAAACCAACTGTGAGCTCTCATGGCCATAAAGTGCCATTAGTCACCACCTCACAGACAGCAGTGCATCCTGGTCCTGCACTGATGTCCCAGAATCCTTTGCAAGCAAAAcctctcttttctttgtttggggaTGGTGTCTCTGAAACAAAAGCTGACTGGAAATTACTTCCAAGGAAAAATGAAGACAGGTCTTTCTCTGAAGCATCTGGAATATCTGGAAGCTTCTCAGCTGAGCTGGATGCTGTTTATCGACTGTATTGCCGTGAATACGAACTACAGTTACAACTACAGCAGCAGCAAATTGAATTACAGAAACAACAATTGCAGCTTCAACAACAACTGCAGCAAGTTGAGGCTCTACAgcagaaacaacaacagcaacaacaacaaagacaagaGCACCAGCCACAGCAGCTTCAAGCACAGCAAGTGCAGCAAGAACAGCAAACACAGCAAGCGCAGCAAGTGCAGCAAGCACAGCAAGCGCAGCAAGTGCAGCAAGCGCAGCAAGCACAGAAAgcacagcaacagcagcagcaacaacaacaacaggttCAACAACCACAGCGTCAACAACCCGTAGGACAGATATCCCCTATGCAGGGTGTGGTCAGAGTCAGTCTCAAACCAGACCCAAAAACAGTCGTAAATGACACAATAGAAGACACTCCTTCTTTGTTACTAGCTCCCAGACCTTCTTCAAAACCGCACCAAGTGTCACCAGCCAAGGTGCTTGTTCCCACACCAGAAGGCTTGTCTTCTGCGCCGACTAATAGCCGGCTTTTACCCAACACTGAGCCACAGACTCCAACGATAGGCCCAGCCTCAGGTACATCCATATCACCAGACCACCTAACTGCAGGGACTGAGGTGCCTGTGCCTCTCAAAAGGGAAAATGAACGAGTGGTTCAGAAAAGGGAACATAGAGACCTCATGAGATCAACTGTTCCTGATCGGGCGGTGTCCACTCCTCGTATTATCAGTCATACAAGGTCAGGCTTTGAACATCACCTAAATCTTGGACATGAAGACGAGTTCAGAGTACCAGTTGATCATTCAAACTACCAAAGTGTGTTGCCTGCCGAGTATAATGCAGATGATAACTCATCATCTGGTCCACAACACATTGGAGACAAAGGAAGCACAGAGTTTAACAGTAGCAGGACATCAGTTTTCAGGTACTCTGGACATAGTCAAAGCTGTGATGTGTCTGGTGATAGGGAGAACATTCAGCCGGCATTGAGGTCAAGAAGGGATCTGGAAATCTATTCACGTCCAAATATGTCCAGTGGAAGAGAAAGCAGTCGTTTCATTTCCCCAAACTCAAATTTTGAGGTTAACtctgaaagaaatatttctaTAACCAAGCAATTTCAACCAGACactcatttttacaaagcagCTGGAACTAGGGATCAGTATCCATTTTCCTATGTTCAAATGGTGGAATCGTTGAAGCAGCAATCTGATGGGAGAGATCAGCACTATTCACTACACAGTGCAGCTCATACAGCCGGCGAGATGCTTTTGCAAGATGAACCTGTTTCATTTAGGGCTCACAGGGTGGAAAGAGGACGGAACAGAGTTCCTTTGGATAGTCCTTATCCACTGTCACTAGTGGACATAGTGGATGGCTTAGAAAATATCCCTGATAAACTCAAGGAACTTTGCAGAAATCCAGGACTTGCTGAAGGACTGGACACTACAGACTTTGGCTATTCACAGCACACTTACAAACAGAGAAATCCACTGAACAGTGTGAGTGTCAACACCGATGAAGAAGAGGCAGCTGTTCTTGAGGACATTTTCTTTCGACCTGGGAGAGCGTGA

Transcript

BRAKERYMET00000021813

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6NZK5	Protein hinderin OS=Mus musculus OX=10090 GN=Kiaa1328 PE=1 SV=2
Q86T90	Protein hinderin OS=Homo sapiens OX=9606 GN=KIAA1328 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006660 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15369 all species →	KIAA1328	Uncharacterised protein KIAA1328	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032736 all species →	Family	Protein hinderin	Interproscan
IPR051644 all species →	Family	TRAMP complex component and AT-rich DNA-binding protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46543 all species →	ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0031499 all species →	Cellular Component	TRAMP complex	Interproscan
GO:0043629 all species →	Biological Process	obsolete ncRNA polyadenylation	Interproscan
GO:0071031 all species →	Biological Process	nuclear mRNA surveillance of mRNA 3'-end processing	Interproscan
GO:0071035 all species →	Biological Process	nuclear polyadenylation-dependent rRNA catabolic process	Interproscan
GO:0071036 all species →	Biological Process	nuclear polyadenylation-dependent snoRNA catabolic process	Interproscan
GO:0071037 all species →	Biological Process	nuclear polyadenylation-dependent snRNA catabolic process	Interproscan
GO:0071038 all species →	Biological Process	TRAMP-dependent tRNA surveillance pathway	Interproscan
GO:0071039 all species →	Biological Process	nuclear polyadenylation-dependent CUT catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000021813.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.