Gene detail

Detailed information of BRAKERYMEP00000021982.1 in Astreopora myriophthalma

Genomic Location: :...
NR annotation: XP_044165461.1, uncharacterized protein LOC114965419 isoform X4 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERYMET00000021982

ATGCAGCTATTGGGTAGCGACACTTACCAGTGTCAATACGCATCCTTTAGCCGACGTTTCTCAAGTGGAATCCCTATACGCGTGTTTGCAACAGTTAATCACAGGGACAATTCATCTGCAGTCCATGATTCTGTTCTTGCGTGGGTGGAAGATATCTCAACCACTCGTTTCAAGGCCTGTGTTGTGATAGGCGGTCAGGGTTCCGGCGCAAACAGCACGATCGATTGGTTTGCTTTTCAAGGCCTCCAGTCAGGAGTCGAACACGGTCAGGCTAGATTCATGCTGTTTACAACTGGAACAAAATGCAAGCAAGTGGCCTTTTCTCAGGCTTTTTTAACAATTCCCAAGGTGCAAGTAACCGTCCAACATGGATCTCTTGATCAAAAAAAGGATGCAGTGAATGTGTGGATTGAAAGTATTTCCAGGACACGGTTAGAGATTTGCTTACGAGAGTCAAGGACGTTCGATGGACCTCACGAGAATCTTTACGTGAGTTGGATGGCATACGAAAACTCTCCACCGTCCTGGAAAGCTAAATATTCATCCAAGATCTTGTTTTCGACTTACGAGATTCCAACAGCGCAGGACAATTATGCTCTCTGCAGGACCATCAACTTTACTGCGCCGTTCTACGAGCAACCAAAATTACTTGCAACTGCAGTCAAGAACGCATCCAACCCCAATCAAATCTCCGTGGTGAAGGGTCCATTGAGTAGCTGGGTGGAGGAAATCAGCCGGACTCATTTTCGTGTGTGCCTCAAAGACTATGCTGGGATTGATGGTCAGAGAGTAAACGTAGCAGTTCACTACGTGGTTATTGGAGACATTGATCCCTGCAACAACGTCAGCTGCGAGTATTACGGCAAACCAGTGGCTTATTCCCCACAACAGTGCGATTGCATATGTGAAAGTGTTTGTCCTGGGTATCAAGAAGAGATGTGCGCTTCCAATGGTCGTACGTTTAGAAACTTGTGCTTGCTGAAGAAAGAGATCTGTGAAACGCGTGGTAATTATACGCACTATCACCCCGGAAGTTGTGCAGgttttCCACTACAGAAAGGTAGACATAAGTTCAAGAATCGCCCTTCCTGGGCAGAGGACCAGTGTGAAACTATTCAATTTGAACCGTTCATATTTTATCCTCATCAAAAGATCTTTATACAGCTTACCGTGAATCACGTGAACTATTCTGACCCAACTTACGTCCACGATGCGACAACACCGTGGGTTGAAAATGTCAATAGCACTCAATTCACCGCTTGTGTAACTCGAGCAGGACGAAATGATTACCCATCAGATAGCTTTGCTACGGTGGATTGGGTTGCTTACCAGGGTGCTCCCGCAGGAGGAATTGTCGGCGAGAAAAACTTTTCCCGTTGGTGGACAGGTACAAGCTGCCAGACAATCACATTGCCAAACGGGAAATTCTCCTCTCCACCAACTGTATTCGTGACAGCCGAACACCAGAGATCTCTCTTGAAGCATGATGCAGCCACTGTTTGGTTAGAAGACCTATCGGCGAGATCTTTTAAGATTTGCATCCGAGAACTTCAAAACTTTGCAGGGGTCCACGATGATATCTCTGTGAACTGGTTGGCGTTCCAGACTTTACAGAGACCGCTTTTTTCAGAGCATAACAATGTTAACTTCTCAAACGGAAACGCGCCTTTGAAGagtcaaaattttgctttttgtcagGATGTGAATTTTACCCGGAGCTACACCAAATATCCAACAGTGCTCCTTTCAGCCAAACATTCCAGTGGAGGCGGGAATACATCACCAGAATGCAACGGAATTGTCAGCTGGGTCGAGTTTATCACGAACTCAGCATTCAGAATTTGTGTCAAAGAGCTATTTGTACAACGGTTTGACCCACTGACTGTGTCATACACAGTGTTAGCAGATGTGTGCTCTGACGGCTGGACTTATTTCAGTGGATACTGCTACCGAAAAGTATCATCTTGTGAATCGTGGAGTAACAGCCAGAAAACGTGTGCCACACTTGGGGCCAATCTTCCCAGTGTCCACAGTCAAGAAGAAAATGTGTATATCCAAAGCCTGCACAATGGAGAAACTGGTTGGCTTGGGTTGTCTGATGTCAACACTGAAGGAACATTTGTTTGGAGTGATGGCACTCGATTTAGTTTCCATTACTGGGCAACGCATCAGCCCAATAACTTTCGCAATGAGGATTGTGTGCACACCCTTGGCTTTCTTCAAGACCACAAATACGAATGGAATGACGTTAACTGTTCAAGCTGCCATAAGTTCAGCTGCAAGAAAGATCTTGACGAGTGTCAGCTAGGTTCATATTCGTGCCACGCGCGAGGTAATTGTGTGAACATTCCCGGCTCTTACAACTGCACATGTCAACCAGGTTACGGGGGAAACGGCAAGACTGTTTGTGAAGGTCAGTATGAATAA

Transcript

BRAKERYMET00000021982

Protein

Uniprot

Uniprot term	Description
Q8HY02	CD209 antigen OS=Symphalangus syndactylus OX=9590 GN=CD209 PE=3 SV=1
Q8HY04	CD209 antigen OS=Papio hamadryas OX=9557 GN=CD209 PE=3 SV=1
P60883	CD209 antigen OS=Chlorocebus aethiops OX=9534 GN=CD209 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09458	H_lectin	H-type lectin domain	Domain	Interproscan
PF07645	EGF_CA	Calcium-binding EGF domain	Domain	Interproscan
PF00059	Lectin_C	Lectin C-type domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742	Domain	EGF-like domain	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR016186	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan
IPR019019	Domain	H-type lectin domain	Interproscan
IPR050111	Family	C-type lectin and snaclec domain-containing protein	Interproscan
IPR016187	Homologous_superfamily	C-type lectin fold	Interproscan
IPR036058	Homologous_superfamily	Kazal domain superfamily	Interproscan
IPR001304	Domain	C-type lectin-like	Interproscan
IPR049883	Domain	NOTCH1 EGF-like calcium-binding domain	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR037221	Homologous_superfamily	H-type lectin domain superfamily	Interproscan
IPR018378	Conserved_site	C-type lectin, conserved site	Interproscan
IPR002350	Domain	Kazal domain	Interproscan
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22803	MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0007155	Biological Process	cell adhesion	Interproscan
GO:0030246	Molecular Function	carbohydrate binding	Interproscan
GO:0038023	Molecular Function	signaling receptor activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan