Detailed information of BRAKERYMEP00000022461.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: CAH3192975.1, unnamed protein product [Porites evermanni]
Species abbreviation AMYRI · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6GM44E3 ubiquitin-protein ligase MARCHF5 OS=Xenopus laevis OX=8355 GN=marchf5 PE=2 SV=1
Q3ZC24E3 ubiquitin-protein ligase MARCHF5 OS=Bos taurus OX=9913 GN=MARCHF5 PE=2 SV=1
Q0X0A5E3 ubiquitin-protein ligase MARCHF5 OS=Chlorocebus aethiops OX=9534 GN=MARCHF5 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007794 (this species only)
Ubiquitin familyE3|E3 activity RING|PHD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12906
all species →
RINGvRING-variant domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011016
all species →
DomainZinc finger, RING-CH-typeInterproscan
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46283
all species →
E3 UBIQUITIN-PROTEIN LIGASE MARCH5Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008270
all species →
Molecular Functionzinc ion bindingInterproscan
GO:0000209
all species →
Biological Processprotein polyubiquitinationInterproscan
GO:0005741
all species →
Cellular Componentmitochondrial outer membraneInterproscan
GO:0061630
all species →
Molecular Functionubiquitin protein ligase activityInterproscan
GO:0090140
all species →
Biological Processregulation of mitochondrial fissionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERYMEP00000022461.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP