Detailed information of BRAKERYMEP00000023055.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_020622171.1, U6 snRNA phosphodiesterase-like [Orbicella faveolata]
Species Astreopora myriophthalma · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5I0I5U6 snRNA phosphodiesterase 1 OS=Rattus norvegicus OX=10116 GN=Usb1 PE=2 SV=1
Q9BQ65U6 snRNA phosphodiesterase 1 OS=Homo sapiens OX=9606 GN=USB1 PE=1 SV=1
Q91W78U6 snRNA phosphodiesterase 1 OS=Mus musculus OX=10090 GN=Usb1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003998 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09749
all species →		HVSLUncharacterised conserved proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027521
all species →		FamilyU6 snRNA phosphodiesterase 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13522
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000175
all species →		Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0004518
all species →		Molecular Functionnuclease activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0034477
all species →		Biological ProcessU6 snRNA 3'-end processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K20302TRAPPC3, BET3; trafficking protein particle complex subunit 3-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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