Gene detail

Detailed information of BRAKERYMEP00000023067.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: CAH3026610.1, unnamed protein product [Porites evermanni]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
C3ZBT0	Flap endonuclease 1 OS=Branchiostoma floridae OX=7739 GN=FEN1 PE=3 SV=1
Q5ZLN4	Flap endonuclease 1 OS=Gallus gallus OX=9031 GN=FEN1 PE=2 SV=1
B3RVF0	Flap endonuclease 1 OS=Trichoplax adhaerens OX=10228 GN=FEN1 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003834 (this species only)

Pfam domain

No Pfam domain signature was detected for BRAKERYMEP00000023067.1. This gene does have a gene model — the search simply returned no hit.

InterPro

InterPro term	Type	Description	Source
IPR036279 all species →	Homologous_superfamily	5'-3' exonuclease, C-terminal domain superfamily	Interproscan
IPR006084 all species →	Family	XPG/Rad2 endonuclease	Interproscan
IPR008918 all species →	Conserved_site	Helix-hairpin-helix motif, class 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11081 all species →	FLAP ENDONUCLEASE FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000287 all species →	Molecular Function	magnesium ion binding	Interproscan
GO:0004523 all species →	Molecular Function	RNA-DNA hybrid ribonuclease activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0008409 all species →	Molecular Function	5'-3' exonuclease activity	Interproscan
GO:0017108 all species →	Molecular Function	5'-flap endonuclease activity	Interproscan
GO:0030145 all species →	Molecular Function	manganese ion binding	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000023067.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.