Gene detail

Detailed information of BRAKERYMEP00000023288.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_015762675.1, PREDICTED: beta-lactamase-like protein 2 [Acropora digitifera]
Species abbreviation AMYRI · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q0V9A9	Endoribonuclease LACTB2 OS=Xenopus tropicalis OX=8364 GN=lactb2 PE=2 SV=1
Q5XGR8	Endoribonuclease LACTB2 OS=Xenopus laevis OX=8355 GN=lactb2 PE=2 SV=1
Q6NYF0	Endoribonuclease LACTB2 OS=Danio rerio OX=7955 GN=lactb2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005081 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17778 all species →	BLACT_WH	Beta-lactamase associated winged helix domain	Domain	Interproscan
PF00753 all species →	Lactamase_B	Metallo-beta-lactamase superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR041516 all species →	Domain	LACTB2, winged helix domain	Interproscan
IPR036866 all species →	Homologous_superfamily	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	Interproscan
IPR001279 all species →	Domain	Metallo-beta-lactamase	Interproscan
IPR050662 all species →	Family	Secondary metabolite biosynthesis-associated thioesterase	Interproscan
IPR036388 all species →	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23131 all species →	ENDORIBONUCLEASE LACTB2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003727 all species →	Molecular Function	single-stranded RNA binding	Interproscan
GO:0004521 all species →	Molecular Function	RNA endonuclease activity	Interproscan
GO:0005759 all species →	Cellular Component	mitochondrial matrix	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000023288.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.