Detailed information of BRAKERYMEP00000024510.1 in Astreopora myriophthalma

Genomic Location: BLFK01000704.1:5886382...5892526
NR annotation: CAH3034073.1, unnamed protein product [Porites lobata]
Species Astreopora myriophthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q15696U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 OS=Homo sapiens OX=9606 GN=ZRSR2 PE=1 SV=2
Q15695U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1 OS=Homo sapiens OX=9606 GN=ZRSR2P1 PE=1 SV=2
Q64707U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2-like OS=Mus musculus OX=10090 GN=Zrsr2-ps1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001458 (this species only) · gene tree & orthology

 Pfam domain
No Pfam domain signature was recorded for BRAKERYMEP00000024510.1 in Astreopora myriophthalma.
 InterPro
InterPro termTypeDescriptionSource
IPR012677
all species →		Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR036855
all species →		Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan
IPR003954
all species →		DomainRNA recognition motif domain, eukaryoteInterproscan
IPR009145
all species →		FamilyU2 auxiliary factor small subunitInterproscan
IPR000571
all species →		DomainZinc finger, CCCH-typeInterproscan
IPR035979
all species →		Homologous_superfamilyRNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12620
all species →		U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNITInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0000398
all species →		Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0005681
all species →		Cellular Componentspliceosomal complexInterproscan
GO:0030628
all species →		Molecular Functionpre-mRNA 3'-splice site bindingInterproscan
GO:0089701
all species →		Cellular ComponentU2AF complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K24273ZRSR; U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein-Spliceosomeko03041deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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