Detailed information of BRAKERYMEP00000024544.1 in Astreopora myriophthalma

Genomic Location: BLFK01000704.1:7120212...7132123
NR annotation: XP_044183151.1, uncharacterized protein LOC114970278 [Acropora millepora]
Species Astreopora myriophthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P20063Low-density lipoprotein receptor (Fragment) OS=Oryctolagus cuniculus OX=9986 GN=LDLR PE=2 SV=1
P35952Low-density lipoprotein receptor OS=Rattus norvegicus OX=10116 GN=Ldlr PE=1 SV=1
P35951Low-density lipoprotein receptor OS=Mus musculus OX=10090 GN=Ldlr PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003521 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00058
all species →
Ldl_recept_bLow-density lipoprotein receptor repeat class BRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000033
all species →
RepeatLDLR class B repeatInterproscan
IPR050778
all species →
FamilyCueball/EGF/LRP/NidogenInterproscan
IPR011042
all species →
Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46513
all species →
VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0017147
all species →
Molecular FunctionWnt-protein bindingInterproscan
GO:0042813
all species →
Molecular FunctionWnt receptor activityInterproscan
GO:0060070
all species →
Biological Processcanonical Wnt signaling pathwayInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERYMEP00000024544.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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