Gene detail

Detailed information of BRAKERYMEP00000024813.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_015769931.1, PREDICTED: serine protease HTRA2, mitochondrial-like [Acropora digitifera]
Species abbreviation AMYRI · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000024813

atggcggccacttgcCGGAGAAGATGGCAGATATTTAGACAAATAGAATGGCTTTCTGGGAGAAGGAAAACAGATAGCACCATCCAAGCTTGTAGAGTATTAAGTACAGAAACCAAGCAATTGACTACAAAAGTCCCCTGGTCTTGGATTGGCTGTCTTGCTTTTGGCGGTTTTCTGGGTTATGGAGCACCAAAATTCATCAAGCACTGTAACGTTGGTACAACAGTAGAAGCAAAGGCCGTCACTAAAGACGAAAGTATATCCGGTTCTGGATCACCTCCTCGATCAGCTAGATTTAATTTCATTGCCGACGCTGTAGAAAAAGCGGCACCCGCAGTTGTCAACATCGAAGTAACGGGACGACATGCAGCTGGGTTCATGTTTGGGTCCCGTGTGGGTCCCACAAGCGCCGGGTCTGGATTTATAGTTACCGAGGACGGAATGGTTCTTACAAATGCGCATGTGGTGGAAAATGCAATGAAAGTTAGTGTTAAATTGAAAGATGGAAGAGAGTTCAGTGGTACTGTGATTGCTATTGACTTAGAGAATGATTTGGCAGCTGTCAAACTTGATTCAGATCATAAGGGCAGCACATACCCATGGACTAAGGAGCTTTCATCTATTTTCGAAGAGGTCTCTACACTTTCAGGGACTGTTTTCTACGCTGGAGATTTCAACACCGATCTGTTGGATCCAGACAAGCCTCCCAAGGATGGTAGAAATCTCTTCGACCTGCTGGAAATCTTTGGTCTTGATTGCTTGATTACAAAAGCTACTCGAAAGACAAATACATCAGAGAGACTCCTGGATTTAATTTTGACCAGTAACAAGAAAAATACACTGGTATCTGATGTAGTGGATACACAGACAAGTGATCATTCACTAGTCTTTACAATTCTAAGGTTGACAGCTCCAAGATCGTGCTCTCGTAAAATTTGTTTACCAAGTCTCAAAAACTTCAACAGAGATAAATTTATTCAAGATCTACAAATGGCACCTTTCTCAATAGTCGATGTATTTGATGGAGTGGATGACAAACTTTATGGCTTTGAACAATTGTACTCTGAAATTCTGAATGAGCAGGCCCCTCTTAAGCAGACTGTTGTCAGGGGCAACCAGGAAAACAATGTTGTTATAAATTATCAAAGGGAAATCGCTGAACTATTTAATGCGCACTTCATTCAAATTGCTGACAGTGTTCCACTGATGAAAGAGACAGATTATGGCCAACCCTTTGAAAACCACCCAAGCACTATAGCTATTCATGGGAAGAACAGGGCAACAGGTGCACCgcttggttttaattttgaataCATTAATCAAGCGCAAGTAGAACGAGCACTCTTAGATGTAAATATCTGTAAATCGTGCGGCCACGATATGCTGTCTCCAAGGCTTGTGAAGGAATCGGCAGCTGTCATAGCTAAGCCTATCACTAATATTTTGAACACCTCCATTGAGCAAGGTTGCTACCCCAATGCCTGGAAAATGGGACAGGTCACACCTCTGTTTAAAAAAGACGAATTCAATAAAGCAAATTACAGGCCTGTCACAGTGTTACCTGTGCTGAATAATATCTACGAGAGACTACTGTCAACGCAGTTGGAGGACTGGAGGTGCATGTGTGATTGGGGGGAACTGGTTGCAGTCGTGTCTATGGACCTTTCTAAAGCTTTTGATGTCATTCAGCATGACTTACTCTTGGCAAAACTCAAGGCATATGGAGTCAGCGAAGGAAGTTGTGTGCTACTTAAGGACTACTTGTCAGGAAGACAGCAGTTGGAGTGTAGTAGACCATGGGTtcagAATATTAAGTTTCCTACTTTAACTCTTGGGTCATCCTCTTCAATTCGACCTGGCGAATGGGTCGTGGCTATGGGTAGTCCTCTACAGCTTAGTAACACTATAACAGCAGGAATTGTGAGCACTGTGCATCGAGCAGGAGTGGAGATTGGACTTCCAAACAGAGCATTGGAATATATCCAGACAGATGCTGCTATTAATATTGGTAACTCTGGGGGACCTCTTGTCAATCTGGATGGTCATGTTATTGGCATAAATGCAATAACCATGCGGTTTGCTGCTGGGATTTCATTTTCTATCCCAATTGATGCTGCCAAAGACTTCCTTTCACAAGCAGTAGAGAGAGTTAAGAGTGGGGACTACAGAAGCAGTAGAAATACAACGAGGCCACTAGCACCATATCAGCGTTGGTACATTGGGATTACCATGTTGACACTTACACCGCAGATCCTTGATGAATTGAGAAGGAGGGACCAAAGTTTCCTCAAAGTTTCACACGGAGTGCTTGTTGCACAAATAAATCATGGATCCCCAGCACACAGGCAAGTAGCTGGTCTACGATCAGGAGACATCATCACAAAAATAAATGAGAATGACACAAAATCATCCACACAAGTTCACCAATGTGTGCGTAAAGGGGGAGCACTGAAAATTCAGGCCACAAGAGGTGAACAATCTCTGAATTTCACAGTTCAACCTGAAGTTGTGGGATAG

Transcript

BRAKERYMET00000024813

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O43464	Serine protease HTRA2, mitochondrial OS=Homo sapiens OX=9606 GN=HTRA2 PE=1 SV=2
Q297U2	Serine protease HTRA2, mitochondrial OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=HtrA2 PE=3 SV=1
B4G316	Serine protease HTRA2, mitochondrial OS=Drosophila persimilis OX=7234 GN=HtrA2 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002592 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13365 all species →	Trypsin_2	Trypsin-like peptidase domain	Domain	Interproscan
PF13180 all species →	PDZ_2	PDZ domain	Domain	Interproscan
PF14529 all species →	Exo_endo_phos_2	Endonuclease-reverse transcriptase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009003 all species →	Homologous_superfamily	Peptidase S1, PA clan	Interproscan
IPR001940 all species →	Family	Peptidase S1C	Interproscan
IPR043504 all species →	Homologous_superfamily	Peptidase S1, PA clan, chymotrypsin-like fold	Interproscan
IPR036691 all species →	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR001478 all species →	Domain	PDZ domain	Interproscan
IPR036034 all species →	Homologous_superfamily	PDZ superfamily	Interproscan
IPR005135 all species →	Domain	Endonuclease/exonuclease/phosphatase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22939 all species →	SERINE PROTEASE FAMILY S1C HTRA-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004252 all species →	Molecular Function	serine-type endopeptidase activity	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0012501 all species →	Biological Process	programmed cell death	Interproscan
GO:0043065 all species →	Biological Process	positive regulation of apoptotic process	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000024813.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.