Genomic Location: not available for this species
NR annotation: XP_029200486.2, pre-mRNA-processing factor 40 homolog B-like [Acropora millepora]
Species abbreviation AMYRI · all data for this species · gene families
| CDS |
| BRAKERYMET00000025599 |
| Transcript |
| BRAKERYMET00000025599 |
| Protein |
| BRAKERYMEP00000025599.1 |
| UniProt accession | Description |
|---|---|
| Q9R1C7 | Pre-mRNA-processing factor 40 homolog A OS=Mus musculus OX=10090 GN=Prpf40a PE=1 SV=1 |
| O75400 | Pre-mRNA-processing factor 40 homolog A OS=Homo sapiens OX=9606 GN=PRPF40A PE=1 SV=2 |
| Q80W14 | Pre-mRNA-processing factor 40 homolog B OS=Mus musculus OX=10090 GN=Prpf40b PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004797 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01846 all species → | FF | FF domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002713 all species → | Domain | FF domain | Interproscan |
| IPR036517 all species → | Homologous_superfamily | FF domain superfamily | Interproscan |
| IPR039726 all species → | Family | Pre-mRNA-processing factor Prp40 | Interproscan |
| IPR001751 all species → | Conserved_site | S100/Calcium binding protein 7/8-like, conserved site | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11864 all species → | PRE-MRNA-PROCESSING PROTEIN PRP40 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000398 all species → | Biological Process | mRNA splicing, via spliceosome | Interproscan |
| GO:0003723 all species → | Molecular Function | RNA binding | Interproscan |
| GO:0005685 all species → | Cellular Component | U1 snRNP | Interproscan |
| GO:0045292 all species → | Biological Process | mRNA cis splicing, via spliceosome | Interproscan |
| GO:0071004 all species → | Cellular Component | U2-type prespliceosome | Interproscan |
BRAKERYMEP00000025599.1.
