Detailed information of BRAKERYMEP00000026041.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: CAH3017103.1, unnamed protein product [Porites evermanni]
Species abbreviation AMYRI · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9BGZ0Intermembrane lipid transfer protein VPS13A OS=Macaca fascicularis OX=9541 GN=VPS13A PE=2 SV=2
Q96RL7Intermembrane lipid transfer protein VPS13A OS=Homo sapiens OX=9606 GN=VPS13A PE=1 SV=2
Q5H8C4Intermembrane lipid transfer protein VPS13A OS=Mus musculus OX=10090 GN=Vps13a PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000772 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12624
all species →
Chorein_NVPS13-like, N-terminalDomainInterproscan
PF16910
all species →
VPS13_mid_rptVPS13, central RBG modulesRepeatInterproscan
PF16908
all species →
VPS13_ext_choreinVacuolar sorting-associated protein 13, extended-choreinRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002999
all species →
DomainTudor domainInterproscan
IPR026854
all species →
DomainVacuolar protein sorting-associated protein 13-like, N-terminal domainInterproscan
IPR031642
all species →
DomainVPS13, middle RBG modulesInterproscan
IPR026847
all species →
FamilyVacuolar protein sorting-associated protein 13Interproscan
IPR031646
all species →
DomainVacuolar protein sorting-associated protein 13, extended choreinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16166
all species →
VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006623
all species →
Biological Processprotein targeting to vacuoleInterproscan
GO:0019898
all species →
Cellular Componentextrinsic component of membraneInterproscan
GO:0045053
all species →
Biological Processprotein retention in Golgi apparatusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K19525VPS13A_C; vacuolar protein sorting-associated protein 13A/C-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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