Gene detail

Detailed information of BRAKERYMEP00000026366.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_029199127.1, kinesin-like protein KIF28P [Acropora millepora]
Species abbreviation AMYRI · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000026366

ATGGCAGAATCGGTCAAGGTTGCTGTACGGGTTCGACCGTTCAACTCGAGGGAGAAAGATCGCGGAGCGAAGCTTGTCATTGAAATGATTGGGGCTACGACGCAAATTACCGACCCGGATAATCCAGGGAACCCGCCCAAGGAGTTTGCGTTTGACTACTCGTATTGGTCACACGATGGTTTTAAAGAGGACGAAAATGGCTATCTCGTACCTGAAATAGACAAGTATGCCGACCAGCGTAAAGTTTTCGACGACCTCGGAGGTGGTGTTTTGAAGAATGCAATTGCAGGTTTCAACTGTTCGTTGTTTGCCTATGGACAAACAGGGGCTGGCAAGTCCTATTCTATGGTTGGATATGGAAACAATAAGGGCATTGTTCCCATCACCTGTGATGAACTGTTTAAGATAGTGGGGAACTCTCCTGGAGATGTGAAATACCAAGTTTCATTCAGTATGTTAGAGATTTACAACGAACAAGTTAGGGATTTACTTGTAAAGAGCAATCCTAAAGGAGGACTTCAGGTTCGTCAAAACCCAAAAGAAGGCTCCTTCTTTGTTCAGAATCTAAAACGAGTAGCAGTTGTTGATTATCCAGACATTGAACGGAGAATTGAAGAAGGAACGGCCAACCGCACAGTAGCTGCAACACAGATGAATGCCACAAGCTCCCGGGCTCACACAGTGGTGACCATAGTGTTTGATCAGATAAGTAAAAACCAGACGGGACAGGAAACCAAGAAGAGCAGTAATATCAATTTGGTTGATCTTGCAGGAAGTGAAAGAGCAGACAGTACAGGAGCAACTGGAGATAGACTTAAGGAAGGTGCTAACATCAACAAGTCCTTGTCAGCATTGGGTAATGTAATCTCAGCGCTGGCTGATCTCTCCATGGGCAAGAAAAAAGTGCTGGTGCCATATCGTGACTCTGTCCTCACCAAACTGCTCCAGAATGCTCTGGGTGGTAACAGCAAGACTATCATGATAGCTGCTTTATCCCCTGCTGATATCAATTATGATGAAACTCTTAGTACTTTGAGGTATGCTGATCGagcaaagaaaatcaagaacaaAGCAGTGGTCAACGAAAATCCAATGGACAAACTGATCAGAGAATTGAGACAGGAAAATGAACGACTGAAAAAGATGTTTGAAAGTGGAGGAATGCCCACTGATGTTGGCGGCCAAGGAATGAgtgacgaagaaaaagaagtaaTGCGCAAAAAAATGAGAGAAGAGCTATTGGCACAGATGGAGTTTAATAATCAGAACATGATGAGCTGGGATGAGAAGGTTGAGATGTCTCGCATTGAGGCATCTGCCGGAGGAGGCCAGGATGAGaagcagaaaaagaaacaaaccatTCCACACTTAATCAACTTGAACGAAGACCCTCAGCTGTCCAGAGTGATTGTCCATTTTCTTGAACAAGCTGAGATGAAGATAGGAAAAAAAGATGCTGAGCCAACCCCTGACATCTCCTTTAGTGGTCTGAGCATTCTCAAGCAGCATGCCTTGATCAAGTCAAACAATGGTGAAATCACCATTGAGCCTGCTTCAAGTGGTGCCAAAACCAAGGTGAATGGGATGCCGCTGACAGGGGAGCGTGTGCTCAAACATTATGACAGAATCTTATTTGgCTCCAACCACATGTATATACTGGTAAATCCAGCTAACAAAGAGAAAGCTGAAGGAACTCCAGATGATGTGGATTGGGAATTTGCCCAGAAAGAAATTGCTCAAGCCAAAGGTTTTGCAACAGGATTTGGTTCTGGACTGTCCAAAGATCAGCAAAGAGCTCAGGAACAAGTGTTAGAGGTACTTCCGATGGTCAGTGAAGTGAATGCAATCAGTGAAGAGCTCAACAAACATAAGAATTTTGAGGTGATTCTAATTTCAGGAGTAGCCCATGGAGAGGGTGGAAGCGCAGAAACAAAAGTAATGGTCAGAATGAAGAACTTACTGAACAACAATGTGTGGCTGTGGGACCGTGGCAAATTCTTGAACAGACGCTTTCTCATGCAGGATTTGTACCAAAGATCCATGGATGGCGAAGATTTGAGTAAAATCCCCAAAGAAGAAGATCCATTTTGGGAGCCACCGGAAGACGTTTTAATCGGAACAGCCAGCGTGTTCTTACAGAGTCTCAGCTATGCTTTGGATTTTGATGATAAACTTTCCATAACGGATTACAAGGGAGAGGAAGTGGCTACTGTTGTCATTAATGTGGCTCCGTGTAGTGCCAATGAGAAACCGCTGGGtgaagatgtttttgttgaGGAGCCATCTGAACTTCTTGGCAAAGACTATCATTATAAGGTTACCATTCGTAATGCCACCGTTCATGACGCCAAGTTTAACAAAGGCTTGTACATCAAGTACAAGCCATTCAAAGAGACAGATTATACCTCAACCAAAACAGTGTCAGGCACCCTGTCTCCTGAGTTCAATCATTCTAAATTATTTTCGTTTGACAAAGTTGAGCAGGATCATCTGGATTGGTTCGATACTGGCTGCATCGTCTTTCAATTGTATGGTCGCCAGGAAGACAGTGATCCGGATGCTACTCGATCAAGAATGACCACTAAGGAACTGCGTCAAATGGAAATGCAAATCGCGCGACCAGGAATTGGTCCTCGCTCTACCACAATGATAACTGCTGACGCATCATCAGCCCAACTCAAGGCCGAGCTTATtttgctgaaaaggaaaaacctACGACTGGAGAAGAAGGAGAAACGCATCCAGGATCTTTGTGATGAATGGGGACAGAAACCGCCTGAAGAACAATCATTTGAAGCGTTCCACCGAGCCGTTTCTGCAGCAGCCGCGCACCAGAGTGGAAAACTGAAGTACAAAGTTAATATGCTCATGGGGTATTTAAAGGATCAAAACGGGACAACAGCAAATGGGGGCCAAATCAAAGTTGACCCGAAAGTAGCTGAAGGAAGTCGTGCCTGTTCTATCATGTGA

Transcript

BRAKERYMET00000026366

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
D3YXS5	Kinesin-like protein KIF28 OS=Mus musculus OX=10090 GN=Kif28 PE=3 SV=1
F8WLE0	Kinesin-like protein KIF28 OS=Rattus norvegicus OX=10116 GN=Kif28 PE=2 SV=1
B7ZC32	Kinesin-like protein KIF28P OS=Homo sapiens OX=9606 GN=KIF28P PE=3 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001130 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12423 all species →	KIF1B	Kinesin protein 1B	Family	Interproscan
PF00498 all species →	FHA	FHA domain	Family	Interproscan
PF00225 all species →	Kinesin	Kinesin motor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036961 all species →	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR022140 all species →	Domain	Kinesin-like KIF1-type	Interproscan
IPR000253 all species →	Domain	Forkhead-associated (FHA) domain	Interproscan
IPR008984 all species →	Homologous_superfamily	SMAD/FHA domain superfamily	Interproscan
IPR001752 all species →	Domain	Kinesin motor domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47117 all species →	STAR-RELATED LIPID TRANSFER PROTEIN 9	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003777 all species →	Molecular Function	microtubule motor activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0007018 all species →	Biological Process	microtubule-based movement	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000026366.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.