Gene detail

Detailed information of BRAKERYMEP00000027098.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_044164590.1, LOW QUALITY PROTEIN: uncharacterized protein LOC114970783 [Acropora millepora]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000027098

ATGCACGAATCAAATGGAGATGTGGTCAACGATCAGAGAGTGGAAACTGTTGTGTCTTCCCATTTGTTTATCGTGGACGAAGATACAACTCCTGTACCCGCAGCGGAAGCAAAAGGTTTTGGTGTCCGCTCGTCCCAGGCTACAAACGAGGACAACCGTGGGGATATTGCCGAGGGAAGACAGGGGTTGTGCCTGCTCTCTGTAACCTTCCTAGAGTCACTGGTCCTTGTCGAGCCGCATTCCGTAGGTGGTATTTCAACAAAGTCACTGGAAGATGCGAACTGTTCACCTATGGAGGGTGTCGAGGAAACGCCAACAATTTCAGGACCAGGAAAGAGTGTGAACAGAAATGCCGACCATCGAAGCCCATACGAGTTACTGACGGACTCATCAGTAATCCGTTCTCTCGGATGCTTCAAAGACACCGGTCGTCGCGCTATCCCACAGATGGATGGCAAGGATATGCTCCTCAGGGACTTCTACCGACGAAGAAAAGACGCCATCCAAAAATGCGCATTAGTAGCTGCAAGGTTTGGTTTTAAAGCCTTCTCGGTACAGCATCAAGGGTGGTGTGCGACAGGTCGCACAGCTCACCTGACCTACTCAAGATACGGACCCTCAAAACGATGCAGAAACGGCAAGGGAGGACCCTGGGCTAATGACGTGTACAGTATCTCAGGGAGATGTCGTAGGAAAACCACATCTCGTTATTGCTGCTCTTTCCCGTTCATCTACAGAGGACGCCGTTATAACAGTTGTACAAGAAGACGCGGCGCAAAAGCTTGGTGCGCTTTGACTCCTAACTTCGATCGTGACAAGAAATGGGGCTACTGTTATCGTCGCAAACCAGTTCGGCCTGTAAGACCAGTTATCCCTCCTGCAAGAGGACGTGTTGTTCAAGTCACCATTGGTCTAAGGGCGAGGGGCGTTGGTTGTTTCAGAGATACCGCCCGCCGGGCTATAGCCATTATGGAAGGTAAAAGTCGTCTTCTTAAGGAAAATTACCGTCGCAGACGAGACGCCATCAGAAAATGCGCCTCTGCCGCTTACAGACGAGGCTGGAGAGTGTTCGCGGTACAGCATGGGGGACAGTGTGCGTCATCCCGTACAGCCTATCGAACGTACGCTAGGTACGGAAGATCCAAGCGCTGTAGAAATGGCAAAGGTGGACCCTGGGCCAATGACGTCTATGTTTTGACAGGTTCTTGCCGCACGCGAACCACTCGCGGTGACTGCTGCGTGTTCCCGTTCATCTACCGCGGCAGACGATACACCAGGCCGAccagggttaatgctaaacGCCCGTGGTGTTCCCTGACTTCAAATTACGACAAAGATAAGCTGTATGGATACACTGGAGGACTAACGCTCCAAAGGATTGGTTGCTTCAAAGACACCTCGCGCCGAGCAATTCCACAACTGGACCAAAAGAGTCGACTCTTGAGAGGAAATTACCAGCGTCGACCGCACGCCATTGCAAGATGCGCTGCTGAAGCCATCAAGCGCGGTTTTACTTTCATGggaatccaacatggcggttgGTGTGCGTCAGGACCTCGGGCCCAGTATACCTTCGGAAAGTATGGCCGATCGAAGAACTGTAGAAACGGCAAAGGCGGAGGCTGGGCTAATGACGTTTACCGGATTATAGGAAAATGTGGACTTCGCACTAGAGCAGGGTACTGCTGTGTACCCTTTACTTATCGCGGGCGACGGTACAATGGTTGCGCAAGAACTCGAACCGGAAGACGATGGTGCGCTATCACTCCCAACTACCGCAAAAACAAACTGTGGGGGTATTGCAGAGGGGGTAGACGACccaaGATCATAAGAGTGACACCTGGAGCTATCATTAAATACACTGGTTGCTATCGAGACACGGGCCGTCGAGCCATTCCAGGACTTGATGGCAAAGACATCTTGATCCGAGACTATTACCGACGACGAGCGGACGCCATCAAGAAATGTGCCCTGGTTGCCATGAGGTTTGGGTACCGAGCATTCGCTGTACAGCACCAGGGATGGTGCGCGACTGGACCCAGAGCTCACTTGACCTACTACAAGTATGGACGGTCTAATCGATGTAAGAATGGTAAAGGAGGCCCTTGGGCTAATGATGTCTACACTGTATATGGATCTTGCCGAAAGCGAACTACTTCAAACCACTGCTGTATGTTCCCCTTCATCTACAAGGGTCGTCGTTATAGAAGTTGTACGTTGAAAAACAGCAAACGAGTTTGGTGTGCTCTGACGCCCAACTACGATCGAGACAAGAAATGGGGATACTGTACCAGACGTCCCATTAAGCCAATTAGACCTGTCAGACCCGTCAAGCCAGTCAGACCTGTCAGACCCATTAGACCAGTCAGACCTGTTCGACCTGTTCGTCCGGCCCCGGTACCAAGATTACCTGCTGGAAGTGTCTCCTATATTCCGGTTACCGCTGACATCGCCTTCCTGATCGACGGCTCTCGCTACGTCGGTCGTCGAAACTTCCATCTTGAGAAGGCCTTCATCAAGTCCATCGCTCGACGCTTCACAATTACCAAGCACCAATCGCACATCGGCGTTGCGACTTACGGAAGCCGACCACAACTGCACATGCGTTTCAACCAATACAGCTCTCTGGGTCTGGTGCTGAATGCGTTGAATTACATCCGCTATCCAAACCAGAACGGAAGACGAGTGGATCTGGGAATGAATTCCGCTTTGCGATATTTCTTCAACAGAAGATATAAATACTCTTTCGTTCAAAAGATTCTCGTTGTGGTTGTGAGTGGAAGGCAAACTGGCCGCTCATATTACATCATGAGGCGACTGCGCTATCAGTTCGCTCGGCTTGGTGTCAAGGTGTATATTGTGGGCGTTGGTCGCATTGATTACAGATACCTCCGTCCAATCACTTACAAAAACAGGCACGTGTACTCTGTCCGCTCCTACGGAAGCCTGGTTACGAGAGCCGGTCAGATAGCTAGAGCTATCCACAGTGAAATGCGCATTGAACGAGAGCGATATCGAGATCAGCTGATCAAGCTCCTTGACCTCCGTGCGCGCCTCTCAAACAGAAGCGACGAAGACTGGGAACGAGACAGAAACACCAACACTGATCAACGCAATCAAACAGAACCGGAAGATGACGCGACTCTGCCCGAGCCCCACAAAGCCTTTTGGGGTCAGCATTCGAACAATACTGAGGATGACTGGGCACGAAACCGCAATGACACTGTAACTGACGCTCCTGAACAGAGCAACTCGACAGAATCGGAAGATGACCGCATTGAACGAGAGCGATATCGAGATCAGCTGATCAAGCTCCTTGACCTCCGTGCGCGCCTCTCAAACAGAAGCGACGAAGACTGGGAACGAGACAGAAACACCAACACCGATCAACGCAATCAAACAGAACCGGAAGATGACGCGACTCTGCCCGAGCCCCACAAAGCCTTTTGGGGTCAGCATTCGAACAATACTGAGGATGACTGGGCACGAAACCGCAATGACACTGTAACTGACGCTCCTGAACAGAGCAACTCGACAGAATCGGAAGATGACGTCAGTCTTGCCGAGCGCCACGAATCTCACGACGTCCCTggacaaaacaatgaaacagaATCGGAAGATGCCACTAGTATAGTCCAGCCCCAGGAAGTTGATCATCAGCGTGCCAACGGTACCGAGGAAGACTGGGATGGAAACCACAACGCGACTGTGACCGATGTCCCGGAACAAGGAAGTGGATCAGAATCCGAAAATGTGGACAATGTGGTCAAGCAAGAACTGGATAATCACCGATCCAACGGTACCGAGGAAGACTGGGGAGGAAACCGCAACGCGACTGTGACCGATCTCCCGGAACAAGGAAGTGGATCAGAATCCGAAAATGTGGACAATGTGGTCAAGCAAGAACTGGATAATCACCGATCCAACGGTACCGAGGAAGACTGGGCAGGAAACCGCAACGTCACTGTGTCCGATGTTCCTAAACAAGGAAGTGGATCGGAATCCGAAGATGTCGCAACTCAGCCGAAGCCCCACGAATTTAGTGGTCACCGTTCCAACAGCACCGTCGAAGACCCGCGACCAAAACGGAACGGCACTTTTAATGACTTCTCGGATCGACGCAATGGAACGGAACTGGGACATGTCGCCAACATTGTCAAGCTGCACGAATTTGATGGTGAAGGATCCAACGGTACGTTGGAAGACTGGGGACAAAACAGCACCACCTTGACCAATTTATTCGACCAGCGCAACGGAACGGAATTGGAGACTCTCTCGTAG

Transcript

BRAKERYMET00000027098

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q90611	72 kDa type IV collagenase OS=Gallus gallus OX=9031 GN=MMP2 PE=1 SV=1
P00748	Coagulation factor XII OS=Homo sapiens OX=9606 GN=F12 PE=1 SV=3
P52176	Matrix metalloproteinase-9 OS=Bos taurus OX=9913 GN=MMP9 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007726 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00040 all species →	fn2	Fibronectin type II domain	Domain	Interproscan
PF00092 all species →	VWA	von Willebrand factor type A domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000562 all species →	Domain	Fibronectin type II domain	Interproscan
IPR036465 all species →	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan
IPR051666 all species →	Family	Seminal Plasma Capacitation Regulator	Interproscan
IPR002035 all species →	Domain	von Willebrand factor, type A	Interproscan
IPR013806 all species →	Homologous_superfamily	Kringle-like fold	Interproscan
IPR036943 all species →	Homologous_superfamily	Fibronectin type II domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22918 all species →	SEMINAL PLASMA PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008201 all species →	Molecular Function	heparin binding	Interproscan
GO:0009986 all species →	Cellular Component	cell surface	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05216	P2RX2; P2X purinoceptor 2	-	Ion channels	ko04040	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.