Gene detail

Detailed information of BRAKERYMEP00000027263.1 in Astreopora myriophthalma

Genomic Location: :...
NR annotation: XP_048583439.1, uncharacterized protein LOC125562994 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERYMET00000027263

ATGGCGTCTACTCACCGTGCACCGAAACAGTGGTGCCTTTCCAAGGTGGAAACAATCAACAGCTTTGAGAACTGGAAGCAAAATCTGCTGTACACGTTATCCTTAGATAGCAACTTTGCCCCCTTCCTCGCAGATGGTTTCACGTGGTTGAAAAAGACCAAAGCCCAACTGCTTCGGGGACTCGAAAGCGATGGCAAAACCGTCCCACTCAGTCGACGCCTAACCGCTCCTCAGAAAGCCAATTTTCTCGAGCTGATGCTACGTCAAATTGCCAACTACTGCCCTATTATTTCACGAAGTACCCTGGTGAAGAACTCAACCTCTCTCGAGTTCATCTGGCAAACTATTCGACAACACTTTGGATTCCAAGTCACTGGCGCACAATTTATCGACTTTTCCGACATACACCTAGCAGCAGATGAGCGCCCCGAGGATCTTTACCAACGCCTCGCGGCCTTTGTGGAGGATTCCTTGCTATGTGCCAATGTTTTAACTCACCATGGCGAACAAGTTCCGGAGGATGAGGAGCTAACTCCTACCCTTGAAAGCTTCATCGTCCTTACCTGGCTGAGACTGATTCACCCCAGTCATCCTCGATTGGTCAAACAGCGCTATGGAACAGAGTTGCGTTCTCGCACGCTCGCCTCAATTAAGCCAGAAATCTCACAAGCCCTTAATTCTCTTCTTGAGGAAATACGCACCTCAGATGACGCTAGGATCCTGCGTGCCGCAGTAGCTGACGATTTTCACCGTCCCCGTCCAGATACCAGGCATGCCATAACAGCTGGTCGTCCTTCTCAGGAATCCATCAGCTGGACTGATGATCTAAGGACCGCATTCCTTAGTGCTCAGAATGCTCTGTCCTCAGCGCTCACAATCACGTTACCCAGACCTGAGGACCAGCTGTGGATTGTAACTGACAGCGCAGTCAGGGATTCAGGAATAGGTGCCACCCTCTATGTGACTCGCAGCGACAAGTTACATGTTTCAGGTTTCTTCAGTGCTAAATTGCGGGGCTCCCAGACCACGTGGCTTCCATGCGAGGTAGAAGCCCTCTCCATTGCGGCTGCTACAAAACACTTCAGCCCTTACCTTATTCAGTCATCCAAGAAAGCCTGCATCCTTACTGACAGTAAGCCCTGCGTTCAGGCTTATGAAAAGCTCTGTCGTGGAGAGTTTTCTGCCAGCCCTCGTGTATCCACTTTCTTATCTGTTGTGAGCCGCTACCAAGCTTCAGTTCGGCACGTTTCAGGCACCTCCATCCTGCAGTCAGACTTCGCAAGCCGAAACGCCGCCCCCTGTGATAACGAGACCTGTCAGGTGTGCGCCTTCATTACTCGAACCAGGGACTCTGTTCATGATGTCCTCCAAGGCAACGTCCGCCTTCCATTCACCAGCAGGCCCGCCTGGATGGCTGTCAAGTCGGAATGCCCAGATCTACGCCGTACACACGCACATCTTGCCCAGGGTACAAGACCGTCCAAAAAACTCACTAACATCAAGGACGTCAAACGTTATTTACAAGTTGCATCTATCGCAGATGATGGCCTCCTTGTTGTGCAATGTCATGATCCTTTGTCACCGACCAGAGAGTGCATTATCGTCCCACGTCAGGCTTTGGATGGCCTTTTGACTGCCCTCCACATTCAGCTTGGCCACCCATCCTGTCACCAGTTGAAGATGGTTGTCAAACGGTATCTTTTCGCCCTCGACCTGGACAAGGCAGTCTCTCGTGTCTCTGAAGGATGCCACTCCTGTGCAGCCATCCAGAACTCTCCAACTGCACGTATTGACCAGTCCACCTCGCCACCTCCTGAAGCTATCGGCCAGTCCTTTGCAGCAGATAAGCACAGAGTTACGATCGAGCTTGGCCGGCCCAAAAATCCCAACAAGAACCCCATCGCTGAAAGGGCAGTCCAAGAGTTGGAAACAGAACTTCTATGTCAGGAGCCTCTTGGCGGTGCTGTCTCTCCCCTCACTCTCGCCGTAGCCACTTCTGCCCTGAACTCGCGTATCCGTTCACGTGGCCTATCCTCACGAGAAATGTGGACCCAGAGGGATCAGTTTTCAAACAAACAGTTACCCCTCGCTGACGACCGTTTAATTGTCCTCCAGCACAAACAGCGTCTCTCCAACCATCGCCACAGTGAGTGTTCCAAAGCTCCTGTGCAGCAAAGGCGCCCTACTCCCCTGATCGATGTTGGCGACCTTGTGTACCTTCATTCCGATCTGAACAAGTCTCGGGCCCGCGACCGCTACCTTGTTGTAGCCATAGCTCCACCATTCTGTGACATCAAAAAATTCATTGGGTCCCAGTTACGTAGCTCCTCATACCACGTGAAGCTGTCTGAGTGCTTCAAGTCAGACTTCGCAAGCCGAAACGCCGCCCCCTGTGATAACGAGACCTGTCAGGTGTGCGCCTTCATTACTCGAACCAGGGACTCTGTTGTCCGCGCCGTGTCTGTTCATGATGTCCTCCAAGGCAACGTCCGCCTTCCATTCACCAGCAGGCCCGCCTGGTTGGCTGTCCAGTCGGAATGCCCAGATCTACGCCGTACACACGCACATCTTGCCCAGGGTACGAGACCCTCCAAAAAACTCACTAACATCAAGGACGTCAAACATTATTTACAAGTTGCATCTATCGCAGATGATGGCCTCCTTGTTGTGCAACGTCATGATCCTTTGCCACCGACCAGAGAGTGCATTATCGTCCCACGTCAGGCTTTGGATGGCCTTTTGACTGCCCTCCACATTCAGCTTGGCCACCCATCCTGTCACCAGTTGAAGATGGTTGTCAAACGCTATCTTTTCGCCCTCGACCTGGACAAGGCATTCTCTCGTGTCTCTGAAGGATGCCACTCCCGTGCAGCCATCCAGAACTCTCCAACTGCACGTATTGACCAGTCCACCTCGCCACCTCCTGAAGCTATCGGCCATTCCTTTGCAGCAGACGTAATGAAACGTTCTCGCCAGCTCATCTTTGTCCTCCGTGAGACTGTGACCTCTTACACTTGCAGTTTATTTCTTGAGAATGAGCGCCACCAAACATTGCGTGATGCCATTATAAAGCTCTGCTTGGAAATGCGCCCTATGGATGGCCCCCCTGCTGTGATCCAAACTGACCCTGCACCCGGCTTTAAGGCTCTTCTCAATGACCCATTCTTAAAGAAGCACAGAGTTACGATCGAGCTTGGCCAGCCCAAAAATCCCAACAAGAACCCCGTCGCTGAAAGGGCAGTCCAAGAGTTGGAAACAGAACTTCTACGTCAGGAGCCTCTTGGCGGTGCTGTCTCTCCCCTCACTCTCGCTGTAGCCACTTCTGCCCTGAACTCGCGTATCCTTTCACGCTGCCTATCCTCACGAGAAATGTGGACCCAGAGGGATCAGCTTTCAAACAAACAGTTACCCCTCGCTGACGACCGTTTAATTGTCCTCCAGCACAAACAGCGTCTCTCCAACCATCCCCACAGTGAGTGTTCCAAAGCTCCTGTGCAGCAAAGGCGCCCTACTCCCCTGATCGATGTTGGCGACCTTGTGTACCTTCATTCCGATCTGAACAAGTCTCGGGCCCGCGACCGCTACCTTGTTGTAGCCATAGCTCCACCATTCTGTGACATCAAAAAGTTCATTGGATCCCAGTTACGTAGCTCCTCATACCACGTGAAGCTGTCTGAGTGCTTCAAGGTCCCGTCTGACTTGGCCGCCCCCATACTGCACCCGCCCTCTGTTGACCCTCACTGTTTGATATCACCAGTGCTTGACCTTTCCGCTGACCCTACCGTGGATGATGCAGCTACCCAGTCGCCATGTCCTGATGCCGTCCCATTGGAGCAAGCAGTCACTTCAGCAGACCCGCCTCCCCCCGGCCTACGGAGATCCTCACGCATTCGGCGTCCTCCTACGCGTTTCGTAGATTATGACACTGAACTCTGA

Transcript

BRAKERYMET00000027263

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17919	RT_RNaseH_2	RNase H-like domain found in reverse transcriptase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR041577	Domain	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12326	RASGRF2; Ras-specific guanine nucleotide-releasing factor 2	-	Ras signaling pathway	ko04014	deepkoala