Gene detail

Detailed information of BRAKERYMEP00000027502.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_022802557.1, vacuolar protein sorting-associated protein 13D-like isoform X3 [Stylophora pistillata]
Species abbreviation AMYRI · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5THJ4	Intermembrane lipid transfer protein VPS13D OS=Homo sapiens OX=9606 GN=VPS13D PE=1 SV=2
Q9VU08	Intermembrane lipid transfer protein Vps13D OS=Drosophila melanogaster OX=7227 GN=Vps13D PE=1 SV=3
Q07878	Intermembrane lipid transfer protein VPS13 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=VPS13 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001911 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16908 all species →	VPS13_ext_chorein	Vacuolar sorting-associated protein 13, extended-chorein	Repeat	Interproscan
PF12624 all species →	Chorein_N	VPS13-like, N-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026847 all species →	Family	Vacuolar protein sorting-associated protein 13	Interproscan
IPR031646 all species →	Domain	Vacuolar protein sorting-associated protein 13, extended chorein	Interproscan
IPR026854 all species →	Domain	Vacuolar protein sorting-associated protein 13-like, N-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16166 all species →	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006623 all species →	Biological Process	protein targeting to vacuole	Interproscan
GO:0007005 all species →	Biological Process	mitochondrion organization	Interproscan
GO:0019898 all species →	Cellular Component	extrinsic component of membrane	Interproscan
GO:0045053 all species →	Biological Process	protein retention in Golgi apparatus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000027502.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.