Gene detail

Detailed information of BRAKERYMEP00000027850.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_029207888.2, mucin-19-like isoform X1 [Acropora millepora]
Species abbreviation AMYRI · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000027850

ATGAGTAATTCAGGCGCGAGTGAACAACCTATTAATGGACCGAAGTGCATTGAAATACCACGCGGCTGGAATCGCATCCTTGAAAATGGTTCGATTTTGTACATAAGtCCAAACAACAGTCGCCTTAGGTCACTGGATCATGTGATTGAATATCTTAAGACAGAGGGTACCTGTAAATGTGGACTGGACTGTCCTCTGTTTGTCCAAAAGGTTTTCAACTTTGATGCCAGAATACCGAGCAAGTTGCTTCCTGCTGGGTCTAGGCCTGAACCATCAAAGTCTGGTTGCAAACATTGTGCTCATGATTATTCAGATGTTTCAAACCCCAAACAACCAGTTGATATTACAGCAAAGCAATCAAATGATGCCACACTACCAACAGTGGGGCAAAAAAGGGGTCCTGGAAGGCCCAGAAATCCCTCGTCAAAGACAAGAAGAGTTGGTGCTCGGAAACCAGACCTTGATCGGCCAATGTCACCGCTTCACAACCTGCCATTGCCTGTCCCCAGCTCAGTGCTCAACAGTCCTGTTCAAAGTGTACCAACTAACATTTCTGTTGAGCAAAGACCTTTACCAAGTTTTGCAACAATTGTGAGCAGCTCTAAGCTCTTCAATCCTGGTGCAAGTTTGGGCAGCAACACTGTACTTGGCAGCAGTGTGGTAACAACTGCAATGAACAGTTCCCCTTTAACAGCAACATCATTGCATTCGTCAGAAGTGACAATTATGAGCAACAGTCTTGCTGTTAGTTCATCCAGTTCTTCAACTGACCCAGCCATAGCAAAATCAACAGAAGCTGTTATTACACAGTCTCTGGTGTCTAGCATTGTGACTGTAAGCCAGCAAAATCCTGCCACTGTTACAATGGCAGCACAGTTACCATCTAGGATCCCTGCATCAACCCAATCCAACAGTTTTGTAAGCCTTGCTGTGAAGAGCAGCCCATTGACTGCATCACCAGCCATCAGCCAAGGCCAAACCAACAAGACCTCCATTTCAAGTTCTACAACATCCGTTGTCACAACAAATACTACAACAGTACCAGCAGCAAAACACAATGTTAGACAAGTTTCTGGTCTTAGCAAGGTTCCTGAAGTCAAAGCAACGCCAAAAGCTACCGGTACGCGAAGCAACAGGCAATCTAAGCCATGTAGTGCCAGGAAAACAGTTGCAGCCTCTCTTAAAGCTGCTGCTGCAGCAGCTGCAAATGCCAAAGTACCCAATTCCTCAGATTCATCAAGAACAGCATTCGATAACTCCTTTCGGAGACCTCAAGCTGTGACAACTGCTAGCACTGGTCCTTCCTCTGAAGTGGCAGCAAACAGAACAGTCAATAAGCCATTCCCTCAAGTCCTACCCACGAGCACAGCAGGTGCATCTACCACAACTGTTCAAGCTCCAGCATTATTCCATAGTGTTCTAAAAGATGCCATTGTTAAGGAACAAGGGCAATCAAACCGTATTGTTTCATCTCCAAATACTCCAGTGCCTGCAATGTCCCATGCAGCGTCCATTCATGCTCCGAGAGTTACTCAGACAGTTAGCACCTCGTCTAGAAGCAAGTCCGAAAACGCCAAAGAAACAGTGCAATCGACAGCTGCTTTGGTTTCAGGTGTCCATGTCCCACCAGCTGTTCCACAGCAGCTTCAAGTTCACAGGCCTCAGGCCCATGGAATGGGACAGCCACTGTTGAATACCACAAGTAGTTTTTATACAGCAGTATCTTTGGCAACCACTGCAAGTCAACAGCCCAATGTCCAGTCTGCTACAGCGACTCAATCTACTGCTCATGTGGTATCATCTTCAGCAAGTGTTTATGGACAGGTGCAAAACGCTGCGGCATCAACCCAAATACCACCACTACAGCTCAATTCCTCTCAAGGTCAGAGTGGTGTGTTCTTTCAAGGGGGTGGAAACCAGTTATTTCAGATGAATCTGGATTCTAATCAACTCAAAGGAGCATATCAGCTTCATGGTGCACTGTACCAAGGAGCTATACCAGCAACATTCCTGACAGCAGCTAATCCAACCAAGGCTGCATCGACCAATCCTCCTGGTTCAGTTCCTCAAGCGTTATACCCTACCAACCCTTACATGCTTGGCATTGTGATGCCCACTGCAGTAACGCAGTCGGTGCCAAATCAGCCAGCTCAGTCAGTAGTAACAACGGCAACATCTCCATCAGCAACACTAGCGGCTGCTTCAGTGGCATCATATCCCTACGTCAATCAAAATGCTGCAATTGCTGCTGCATTCGAATCATTTGTACCCATTGCTCCAGCTGCAGCACCACGATTTTCGCAGACTTTGGCTCATTTGGCAAGTGCTTACACTCCATTTCTGCCCAGGGGAGCCGTTCAAGGGAATGCGCCAGTGCAGTTTGCTGCACAGCGGATGGTGCCAATGGGTGCTATGCAGTCTCAAGCTGGTGGAAATGGTCAAATGGGACCAGCTATATTAAACCTTGCTGATTACACTGTTAAATATCCTCTCAACACAGTGAAACCTGGCTCATTTCCGTCTCAAGCATCTACAGCTACCACCGTTGGCTCACCCAATACTCAGCCCCAAACAGCCGTTGTTGCGGCTATGCCTTATGTCGCATTTGGTCAAATCAACAATCCTCGTTTCCCATTCTCTGTAAATTTTGCAATGCCTGGAACAAGTACTGTTCCATCGGCTACCTCATCTTCCACCCCACCCTCCTGCAGTTTTGTTACATCATTGACAACATCTCACCAGTACACTCCAGGATCTACTGCCGATTCCCAGGGAGGAGGTGGTGTGCTGGGTTATGTATCAATGCCATTGCCGTTTGGCACTAACCCCAGTGGGGCAAGTCAGTTGCAGACCACTCCTAACCCCCAACCGGGCAGTGCTTTTTCCCCACCCTCAAGCCACATCAGTGCAAGTCTTGGTAATCAACGTATGGAACCATTAGGCGTGGCTCAGCAAGTGCCATCGTGGTGTGCTGGCGGTAAAAGCGCGTCTGGTGCTGCTGCGGCCAATCAAAGGCGATGTAGCACTCCAGAGAGTaatagcagtagtagcagtgtCGGTAATAGCTTGGGTTGCTCTAGCCTTGCAAATTCACATTCTCCAATATCAGGTACAGCGAGCAGAAACAACCTTGTTGAATCCAGTTCTTCAAGGACGGCGTCGAAAACATCCCACTCAAACTGCAGTCAGTCGCCGAGGCATCCAGGTTTATCGTCACCTTTAAACTCGCCTTTACCACTGCCGCTGCCTAATCAGGTTCTTGCTGCATGTCAAGGATCTGTAAAGAGTAAGTCATCTCTGGCATCTGTCAGAGGCAGTACAGACAGTATGCCTGTCCACAGTCAATCATTTAATACTTTTGAGATCGATCAGGCAAACACTCCGCTTGAAATGTCCAGTACTTTGAAAAGATCTTGCAACGACAGCAGCGAAGctgcaaaaaagacaaaatatgacGAGTCGGCGTATTACGAAACTAATCCCCTGCTGGGCTTGAAAAGGTCCTGCGAAGCAATTGAGGCGTACTGCAGTCCTCCAAGGGAGGAGACGAATGAcattgatgaagatgatgacgacgacgaggatgaggatgatgacATAAATGATTCTGCGGTTCCAAAAAACGATGCACCTTCCCCTGTGAGCAAAGAAGCAGGGGAAGGAACTGGAAGCTCGGAAACTCATATTAATATGAATAACCGCGACTCCACTGAGAACCAATCAACTCCTGCTGGAATCCAGCCAATCGTAGACCAGCACCAGTCTCACCCGATTTATAATGGAGACGTTTCGGGCAAGCAGAATGAAGAACCACACGAGCAAATGGCCAACCAAGAGCCGTATCTACCAGTCAAGACGATTTCCTTACCGCCGAGTACAAATGAAAAGCAGGAATATCTGGAGAAGCCTCACGTTCCTAATATCAAGCCGCAGTTTGAAATCGGTGATATTGTATGGGCGCAGGCTCGTGGTCTTCCCTCCTGGCCGGGTAAAGTGGTGGACGCAAGCGAAGTGGGAAAAAGCCGAGCGGACGAAGGAAAGCGTTGGGTCATGTGGTTTGGCGATCATACTTTCAGCCAAGTTGAAGTAGACAGACTGAAAACTTTATCTGATGGATTGAGAACGCTCGACGATAAAGCTCGCAAGAAAAAATACAAGGCCAAGAAAACAAGGATTGGTTTAGAGCAGGCGATTAGTGAAGCTCTGGAGGCACTTGAAATGAGAGAACGTCTTCGAGGAAGACAAGCTGCAAGGTCtaaaaccaagaagaaaagaCTTAGATGA

Transcript

BRAKERYMET00000027850

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q96DN6	Methyl-CpG-binding domain protein 6 OS=Homo sapiens OX=9606 GN=MBD6 PE=1 SV=2
Q3TY92	Methyl-CpG-binding domain protein 6 OS=Mus musculus OX=10090 GN=Mbd6 PE=2 SV=2
B1AYB6	Methyl-CpG-binding domain protein 5 OS=Mus musculus OX=10090 GN=Mbd5 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006077 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00855 all species →	PWWP	PWWP domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000313 all species →	Domain	PWWP domain	Interproscan
IPR001739 all species →	Domain	Methyl-CpG DNA binding	Interproscan
IPR016177 all species →	Homologous_superfamily	DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16112 all species →	METHYL-CPG BINDING PROTEIN, DROSOPHILA	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0003682 all species →	Molecular Function	chromatin binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0010369 all species →	Cellular Component	chromocenter	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23219	MBD5; methyl-CpG-binding domain protein 5	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.