Gene detail

Detailed information of BRAKERYMEP00000029701.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_015767392.1, PREDICTED: high mobility group protein 20A-like [Acropora digitifera]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000029701

ATGGACCTTGGAGAAACTGCAGCGTTGCACACCGATTCATCGTTGGAGAACGGGACAACATGTGCGACGGCTACGGCTTTAGCTCAAGTGCTAGACTCGCAGGCTATTTCCAGCAGCTCTCTGGCAACTTTCGCCGTTACTTCCGTGCCAGGTTCGGCCGGTCTTGCTGTTTTAACACCAACTCTTGATGGTACCACAACTGTAACATCTTTACCGGGTTTTACTCTGTCGAGTTTTGATTCAGTTGAGGTGAAACACGTTAATGAATCACACGAGATGGCTGTTGCAACCGTCGGGGAGGATGGAAGCCTCCATTTCACGGCAGCAGCCCACGATGGAGTTACCAATTACCACACATCTCAAGGAAGTCAAGCTTTGCCAACATCTGAGGCTGATTTTGTATCAGACCTCAGTCAAGTTGAGATTCTGAGTGGTGGAGAGAGTGAGGGAGGTTCGTTAGAGGAAAGTGTTTGCCAGGAAACGCAAACACCACAGTCTATGGCAAACTCACGTGGTGATGTTGAAAAATCAGTGAAGAAAAAAGGAGGATGGCCAAAGGGGAAGAAAAGGCGTAAAACCTGTCGAGACACCAATGCACCTAAAGCTCCCCTCACTGGTTATGTGAGGTTTCTTAATGAGCAGAGAGAGAAAGTGAAGGCAGAGCACCCTGAATTGAACTTTCCTGAAGTAACAAAACTACTAGGTGCTCAGTGGAGTAAGCTTTCTGCGGAAGAAAAACAGAGATACTTGGATGAAGCGGAGAAAGACAAGGAGAGATACGTGGTGGAACTGGAAGCGTACCAAAGAACAGACGCCTACAGAAACTTTCTGAAGAAACAAACGGAGAGGAAGAGAAAACATTTAGAGAACTCTGATGGATTAGACTGCTCATCAAATGGTATAGAGCTCTGCGCAGAAGACGATCTCTACTGCAAACCCTGTAATCAGTACTTCAACAACCTTCACAACAAGAGAGAACACATTCTCGGTCGCAAACACAAGCAGACGGTCTCAGGAAAGTTAAACGAAAGTGAAGCGGAAGAGGAAGACTTGCCGGGATTTAGCGCCCCTGTCTTTACGGAAGAGTTTCTCAAGCACAATGAAATGCGCGAAGAGGAATTAAGACAACTTCGTAAAGCGGCAACGGAATTTGAGGAACAAAATGCAGTCAGCTCCAAACACATAGAGAATTTAAAACAAGCCATAGGAAAAATCGAAATGGAAACGAACCAAGAAAGGAACGCTAATATGGTTTTACTTAGTCATTTAAGTAATCTTAGAACAGCTCTTGTTCAAGCATTTGCAAACTTGGTTCTTCCAGGTAACAACGAGGTGCCAACATTAGACACCATTGACTCTTATATGACCAGGTTATATTCTGTTATACTGGACTCACCACAGGAGAACGAGGGTCTCATCTCCAACGTGCGAGAGATTGTGTCACGGCTTGGTTTTCCCAAGATCCTTGCGCTAGTTATGGTCAAGGAGACAACCTTCTACGATCTTCTCGGTGTTTCACCAACTGCCACTGCTAGCGAAATCAAGAAGTCTTACAGGAAACTTGCGTTAAAGTATCATCCGGACAAAAATCCAGATGCAGGCGACAAGTTTAAGCAGATATCCCATGCTTACGAAGTCCTATCAGATGAGAAGAAGCGAAAAATTTATGATGAGGGTGGGGAAGATGCACTGAATGGCGTCAGTGACATGGGAGGGTTTCACTCCCCAATGGATATCTTCGACATGTTCTTTGGAACTGGCCATGGTCGACACAGAGGCTCACGTGGAGAGAGAAAGGGCAAGGATATGATTCACCAGCTTAAGGTCTCACTTGAAGACATGTACAATGGAACAACAAGGCAGTTGGCCTTGCAAAAAAGTGTTCTTTGTCCAAAGTGTGATGGAATTGGAGGAAAGAAGGGATCAGTTGTACCATGTAACACTTGTCATGGCAGTGGAATGTATGTTAGGATCCACCAGATTGCTCCAGGAATGGTGCAGCAAATCCAAACACAATGTAGAGACTGTGGAGGACAGGGAGAGAGAATACCAGATAAAGATCGCTGTAAGAACTGTCAAGGAAGAAAAACAGCCAAAGAACGGAAAATCCTGGAAGTTCATATCGTCAAGGGTATGAGTGATGGACAGAAGATAACATTTAGCAGTGAGGGTGACCAGGAACCTGGTATTGAACCAGGAGACATTATCATCATACTTGATGAAAAGGATCATCCGGTATTCAAGCGAAAGGGCGTTGATTTGTACATGATCTTGGTGAATTTCCCTCCCGATGGCTTCATTACGCCAGCAAAACGTCCACAGTTGGAACAACTGCTTCCTCCAAGGGAAGAGGTCTTGATTCCTGATGATGCTGACGAATACGAGCTTGTGAAAATTGATCCAGATACGGAATCCAGGCATCGGAGACAGCACGGGGGTAACGCGTATGATGAGGATGAAGATTATGCTCATCGAGGACCAGGAGTGCAGTGTCAGTCACAATAA

Transcript

BRAKERYMET00000029701

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P31689	DnaJ homolog subfamily A member 1 OS=Homo sapiens OX=9606 GN=DNAJA1 PE=1 SV=2
Q95JF4	DnaJ homolog subfamily A member 1 OS=Chlorocebus aethiops OX=9534 GN=DNAJA1 PE=2 SV=1
Q5E954	DnaJ homolog subfamily A member 1 OS=Bos taurus OX=9913 GN=DNAJA1 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002175 (this species only)
Transcription factor family	HMG · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00226 all species →	DnaJ	DnaJ domain	Domain	Interproscan
PF01556 all species →	DnaJ_C	DnaJ C terminal domain	Domain	Interproscan
PF00684 all species →	DnaJ_CXXCXGXG	DnaJ central domain	Domain	Interproscan
PF00505 all species →	HMG_box	HMG (high mobility group) box	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001623 all species →	Domain	DnaJ domain	Interproscan
IPR036910 all species →	Homologous_superfamily	High mobility group box domain superfamily	Interproscan
IPR036410 all species →	Homologous_superfamily	Heat shock protein DnaJ, cysteine-rich domain superfamily	Interproscan
IPR036869 all species →	Homologous_superfamily	Chaperone J-domain superfamily	Interproscan
IPR002939 all species →	Domain	Chaperone DnaJ, C-terminal	Interproscan
IPR018253 all species →	Conserved_site	DnaJ domain, conserved site	Interproscan
IPR009071 all species →	Domain	High mobility group box domain	Interproscan
IPR008971 all species →	Homologous_superfamily	HSP40/DnaJ peptide-binding	Interproscan
IPR001305 all species →	Domain	Heat shock protein DnaJ, cysteine-rich domain	Interproscan
IPR036236 all species →	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR044713 all species →	Family	DnaJ homolog subfamily A member 1/2-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43888 all species →	DNAJ-LIKE-2, ISOFORM A-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006457 all species →	Biological Process	protein folding	Interproscan
GO:0051082 all species →	Molecular Function	unfolded protein binding	Interproscan
GO:0031072 all species →	Molecular Function	heat shock protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0030544 all species →	Molecular Function	Hsp70 protein binding	Interproscan
GO:0042026 all species →	Biological Process	protein refolding	Interproscan
GO:0051087 all species →	Molecular Function	protein-folding chaperone binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000029701.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.