Detailed information of BRAKERYMEP00000030673.1 in Astreopora myriophthalma

Genomic Location: :...
NR annotation: XP_044168837.1, LOW QUALITY PROTEIN: polycystic kidney disease and receptor for egg jelly-related protein-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3B7N1Chromodomain-helicase-DNA-binding protein 1-like OS=Bos taurus OX=9913 GN=CHD1L PE=2 SV=1
Q9CXF7Chromodomain-helicase-DNA-binding protein 1-like OS=Mus musculus OX=10090 GN=Chd1l PE=1 SV=1
Q86WJ1Chromodomain-helicase-DNA-binding protein 1-like OS=Homo sapiens OX=9606 GN=CHD1L PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan
PF00801PKDPKD domainDomainInterproscan
PF20519Polycystin_domPolycystin domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF08016PKD_channelPolycystin cation channelFamilyInterproscan
PF01822WSCWSC domainDomainInterproscan
PF18911PKD_4PKD domainDomainInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF02010REJREJ domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014010DomainREJ domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR035986Homologous_superfamilyPKD domain superfamilyInterproscan
IPR051223FamilyPolycystinInterproscan
IPR000601DomainPKD domainInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR000330DomainSNF2, N-terminalInterproscan
IPR002889DomainCarbohydrate-binding WSCInterproscan
IPR043472Homologous_superfamilyMacro domain-likeInterproscan
IPR046791DomainPolycystin domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR000203Conserved_siteGPS motifInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR042060DomainPolycystin-1 like, PLAT/LH2 domainInterproscan
IPR013122DomainPolycystin cation channel, PKD1/PKD2Interproscan
IPR022409DomainPKD/Chitinase domainInterproscan
IPR003915FamilyPolycystic kidney disease type 2 proteinInterproscan
IPR002859DomainPKD/REJ-like domainInterproscan
IPR049730DomainSNF2/RAD5-like, C-terminal helicase domainInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10877POLYCYSTIN FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0050982Biological Processdetection of mechanical stimulusInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04988PKD1L2; polycystin 1L2-Ion channelsko04040deepkoala

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