Gene detail

Detailed information of BRAKERYMEP00000031367.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_029199273.2, ankyrin repeat domain-containing protein 17-like isoform X2 [Acropora millepora]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000031367

ATGTCCGTTTCTTCGTCAGTAATCAGCCGTGTAATTGGTCGAGGAGGTTGTAATATCAATGCTATCCGCGAAACAACTGGAGCGCACATTGACATTGATACGAATCGACAGAAGACAACTGGGAGCTGCATAGTTACAATCAAGGGACCTGCAGACGCCACACGGCAAGCTCACCAGCTTATCCAAGCCCTTGTTAAGGATCCCGAGTGCGACATCAACGATGTTCTTCCTCGAAAAAAGCGCCTTCATTCTCCAATCAGCCGCACAGCTCCCGCCACAACAATCACCACCTCAGTCACATCTACTGTATCACATCATAGAACCCTCTCTGAACCGAAAGCCAGCAACACGTCGACTAAGGTACCTTCCACGACCCACTCCGCACACACTCGAATCACAGCAAAAACTACCACTTCTCAGAGCTTGTCGAGCTCATGGCCATCTACTGGTGCTGCGCCTGCGTCTGTACATTGTCAGGTAACTACGTCAGTAAGTTGTACCACTACCAAAAGCACGGTGACTGCATCGTCAACCCACATACCAAGTACTGCACGTTGGGCCACCACAACGCAAACTTCTTCTGGCAGCAACAAGAAAGTGCCTTTGGCAGCTGCTCAAGTGCCAACCACCAGCTCGCAATCCATCGCAGCCCATGCTTTCCTAGCATCGGCCAGAAAGGCGTCTGGAGGAACAGCAAGTGCTAGTGGCTCTTCTGGCTCAGCAGTGGTTAAAGCTCTGACTCCTGCAAAGCGGCAGCTGTTCCCTGAGACTTCATCCGAGGTGCCAAGGCAGAGCTCAGCCACTAAAACAACGAGAGTGGTTAAGGGTTCTCCCTCTTATTCATCAGTTGCCATGGGGGTCAGTGGATCTGGTGGAAGCGGGTCACCTGATGGAATGGCACCTGTGACGACTTCCTCGTTGTCATCTGGAACGGGCTCCGTAATTGCCTGTTTAGGGTCCTCAAACCTACCAGCTGCCATCAGCAACATCTTGTCAAATGTTGGCCAAACGCTAAGTCCCAGTGTATGGAATGACATCGCTCATCCAAGCATCCGACCAAACGCTGGCACCGTGTCAGAACCGGACCACCCCTCTGCCATTTCTCCAGCTGATCCCATTACTCAGCCCCTGTATATCACCACTCCAGGGGCCCTGTTCACCCCGTTACCTCACGAGGCAGTGTCAACGTCTCCGCCTAACAGCTCTGGTTCCCCAGTCCCGACTACAGCACCTTCTACTTCAACATCGCCTAACTCCTCTCCCCTCGGGACATCACTTGCCCCTGGGAGTGGAACTTTGGCGGAGTCCGCAGATAAACCATTGTTGAGACCTATTGGAACTGAAAGAGCATCTAAAAGGGTGTGCGCTAGTCCACTGCCATCTGTGCCCGGGATATCGCCGTTATTAGGAAGAGAGGGAACTCAAGTGACTGGAGTTTGGAGTTATTCTTATGCCCCAGACCCTTCGCTGACGGGAGGCTGGTCGACTGGCCCTTCTGTCTCAACAGAGCATTCGCCACCACTAATAAGCGGAAGTAACTCGTTGCCAGGCGCTGAGGATGAGCAGTTTGGGGTGAATCCGGGTGATACTCTTCAAACGTTCTTGGAACGTCTCTCGCTCTCCAGCCATCTTAGTCTTTTTCAGAAGAACGAAATAGATCTGGATGCCCTTCTCTTGATGTCGGAAAAAGATTATGCAGATATCGGCTTACCGAAGGGACCACGGGTGAAACTGTTAAGCAGCACTCGGCAGCTTTATACCGGCGACACGCAAGAGTTCAGTTCTGTCCCTCCGGGTCCCACCCCCAGTGCAAGGCCTGTGAGTCGCAGTACTGGTTGGAGTCCTCAAGCGGGGATCATCCCAACATCATCGACTCCCACTTCTGTGGCTGCAGCGGTACCTTACGGGGTGAAAAGAGTGCCGGGTCGGAAGGTCGAACCGAACAAAAGATCGGGATGGAAATCGTGGAACCCGCGAACATCGGTTTAA

Transcript

BRAKERYMET00000031367

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q99NH0	Ankyrin repeat domain-containing protein 17 OS=Mus musculus OX=10090 GN=Ankrd17 PE=1 SV=2
O75179	Ankyrin repeat domain-containing protein 17 OS=Homo sapiens OX=9606 GN=ANKRD17 PE=1 SV=3
Q9VCA8	Ankyrin repeat and KH domain-containing protein mask OS=Drosophila melanogaster OX=7227 GN=mask PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004415 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00013 all species →	KH_1	KH domain	Domain	Interproscan
PF00536 all species →	SAM_1	SAM domain (Sterile alpha motif)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013761 all species →	Homologous_superfamily	Sterile alpha motif/pointed domain superfamily	Interproscan
IPR036612 all species →	Homologous_superfamily	K Homology domain, type 1 superfamily	Interproscan
IPR004088 all species →	Domain	K Homology domain, type 1	Interproscan
IPR001660 all species →	Domain	Sterile alpha motif domain	Interproscan
IPR047373 all species →	Domain	Mask-like, type I K homology	Interproscan
IPR051631 all species →	Family	Ankyrin repeat and KH/SAM domain-containing protein	Interproscan
IPR004087 all species →	Domain	K Homology domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23206 all species →	MASK PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0045087 all species →	Biological Process	innate immune response	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000031367.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.