Gene detail

Detailed information of BRAKERYMEP00000032728.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_029201971.2, LOW QUALITY PROTEIN: uncharacterized protein LOC114966331 [Acropora millepora]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000032728

ATGGCTCCAGAGGTAAAATCCAAAGGAAGACGGGGATGCGGGCAAACTGTTCGTTTGAGAAAAAAGCGATGGCTTCTGAATGGATTGAAAGCGGAAAAGAAATATGTTGCTCCATCACAAACCGGTCCCAACATGCACACCACCAACAGCGGCAAATCCGCTGACCGCGAGTCGTTTATACCGCCCGAGGATGGAATGAGTGAGGTCAGCTTGCAAGATCCTTGGGTCAGAAGGCAAGATGTCGACCATAAGAGGCGTGGACTGGGGTATACCATACCAGAAGATGTTCAGCGACATTCTTCCAAGCCCGACCGGGAACATTTGCTGACCTCCGACAGAGGACTTTTTGTCACCACTGAAGAGCACAATTTTGATATTGAGCCTGCTGTGGAGTACAAAAGCTACAAGCGTCGGTTCTACATTCTCTTGCTTTTTTCTATGATTGGTTTCAGTCAGTACTGCGCGTGGAACACATATGGACCCATTGCCACCACAGCTAAGATGGCATTCGGTTGGTCCAACACGCATATCGCGTTTCTGGCCAGCATGGATCCGATCACCTATCTGTGCACCATGCAGTTCTTCTCTTGGATGATGGACGAGAAAGGTCTTCGATTGAGTGTTATCGTTTCTTGTGCATTCATGTTCCTCGGAACTGGACTCAGATGTGTGACGTCACAACCATCATATGCCATGTGGTCAATGGGTGCTGGTCAGCTACTGAACGGCATAGCGGGTCCTGTCAGTCAAGCTGGACCGACACTCCTCTCATCAACTTGGTTCCCACCTGAGCAGCGGACCACCGCTACAGCAGTCTCAGCTCTGTGTGGTTCCCTTGGCATTGCTATGTCATTTATAGTTGGTCCTTTCGTTGTCAAAGATGTCAAATTTGAATTGGAAAGCATGGAACCTGACAGGGGAAACCTTACTGGAAATTTAagTAACACCTTAGATTTGTACTTGGATGTCAATCTTCCATATTTAGGTTCAATCTACAGAGATGCGGCTTACTACTGGCCATTGGACTATCTAAACATTAGTACCGTGAAAAATGCCCAAGTCGCCAGGAATATTAAAGAAGCAAAGGGCGACGTATGGGACGAATACTGGGGTGTTCAAATCGATAAAGGAACGAAAGAGTTGAAAACAGGCATAGAAGGACTGGTATTCAATGATTGTCAAACGTCAAAGGGTATCGTCAATCAAAGTGTGGAGACCGATGGCAAGGGAGCATGGGTTAATTTAGGTGGTTTTGTAAACACTTGTATGAGCCAACCTTCTCTGTGCCCTCACGGGTTAACTGTGTCACTTTGGATAAAGTACACAATACTGGATAACAACGGACTACAGTACTTGATGGGAACAAGCGGCTCCAAAGAGGGATTGAGAGGATTTTTGATTTATCAAGATTTCTCTTATGATAGAGAGGATCATTTGGCTGTCAAAGTCGAAAACAGCACGGTGCTATGGAAACGGAGCTTTGCTGTGCCACGGGACTCGTGGACGCACGTTGCCTTCACATGGGACGAGCGTCAAGGTCTCGTGATATATGCAAACGGATCGACGGTGGGAGGGGACTCTAAAGGGAAAACAACGAAACCTCAAGTCGATTACTTTACAACGTTTACGCTTGGCAGACCGAACAACGACATGCTGTTCTCTAAGGCGGCGTTTGATGAGATAGCTATGTGGGAACGAAAACTTCATCCTATAGAAATCGAAGCTGTGTATAAACGGACCACAGGGTCTGGACTTGGACCTGATTTAGCGAAAGAAAAAGAACGACTCgtggaagaaggaaaaaaggacATAATGAATTTACTTTATGTTGAATTTGGCGTGGTAACGTTCCTGTTCTTGTTGGTCGTGTTGTATTTTCCAAAGAAACCTCCACTTCCTCCAAGTAGATCTGccaaaagaaagagagaggactttttttctggCACCAAACAGATATTCAGAAATAAGCAGTTTTGGACTCTATCATTGGTGTACGGAGTTACAACTGGTGTTTACAGTGGGTGGGGAGCTTCATTAGCAGTCAATTTAGAGACATTTGACATCAGTCAGAACGAAGCAGGCCGCATTGGTTGCTTTGCCACTGTAGCTGGTATCGGTGCAGGTTTGATATTGGCCAGATGCGCTGACCTATTTGGAGGGAAAATGAAGGCTCTCCTGCTTGTGCTGTTTTTTGGTTCCGCTGGATGTTTCTTGTGGTTCTCGCTTCTCTGTCTCAAAATGATTGAATCTGATAAAGAGGCGCTGTACAAGTCCAGCATTTTAGGCGGGTTCTTCGTGAGTGGTACCATTCCTCTCTTCTATGAGCTTACTGTGGAATCCACCTACCCAGTCGCTGAGGGCGTCACCACAGGCCTTCTGACGATCATGAACAACTGTTTCACTGTAATCTTCCTGCTTGTCTTGATGATACCAGGAGTCGGCACGGTTTGGATGAACTGGTGTATGTTTGGTGCATGTGCAGGCTGTATTCCTGTACTGCTGGGCTTTCACGAACATTATCGAAGGCTCAACATAGACAAAGAAGATTCACCCAAGGACTTCCAAGAGCCACAAGAAAAGGACAAGTTCTTGAGAAGATTACAGTCTCCTTTAGGTTCAATTTATTCTTTGACACGCGAGGACGAGCTTGTTGAGAGGCTTAAAAAAGCAAAGGAGTCTGACATTTAA

Transcript

BRAKERYMET00000032728

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q96SL1	Solute carrier family 49 member 4 OS=Homo sapiens OX=9606 GN=SLC49A4 PE=1 SV=1
Q8BFQ6	Solute carrier family 49 member 4 OS=Mus musculus OX=10090 GN=Slc49a4 PE=2 SV=1
Q66H95	Solute carrier family 49 member 4 OS=Rattus norvegicus OX=10116 GN=Slc49a4 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000479 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07690 all species →	MFS_1	Major Facilitator Superfamily	Family	Interproscan
PF13385 all species →	Laminin_G_3	Concanavalin A-like lectin/glucanases superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036259 all species →	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR011701 all species →	Family	Major facilitator superfamily	Interproscan
IPR013320 all species →	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR049680 all species →	Family	Solute carrier family 49-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10924 all species →	MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0022857 all species →	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0043231 all species →	Cellular Component	intracellular membrane-bounded organelle	Interproscan
GO:0051184 all species →	Molecular Function	obsolete cofactor transmembrane transporter activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000032728.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.