Gene detail

Detailed information of BRAKERYMEP00000032852.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_044176291.1, LOW QUALITY PROTEIN: sequestosome-1-like [Acropora millepora]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O08623	Sequestosome-1 OS=Rattus norvegicus OX=10116 GN=Sqstm1 PE=1 SV=1
Q64337	Sequestosome-1 OS=Mus musculus OX=10090 GN=Sqstm1 PE=1 SV=1
Q13501	Sequestosome-1 OS=Homo sapiens OX=9606 GN=SQSTM1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003508 (this species only)
Ubiquitin family	ULD\|UFD\|PB1 · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00569 all species →	ZZ	Zinc finger, ZZ type	Domain	Interproscan
PF00564 all species →	PB1	PB1 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000433 all species →	Domain	Zinc finger, ZZ-type	Interproscan
IPR000270 all species →	Domain	PB1 domain	Interproscan
IPR034866 all species →	Domain	Sequestosome-1, PB1 domain	Interproscan
IPR052260 all species →	Family	Autophagy Receptor and Signaling Regulator	Interproscan
IPR043145 all species →	Homologous_superfamily	Zinc finger, ZZ-type superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15090 all species →	SEQUESTOSOME 1-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0000423 all species →	Biological Process	mitophagy	Interproscan
GO:0005080 all species →	Molecular Function	protein kinase C binding	Interproscan
GO:0007032 all species →	Biological Process	endosome organization	Interproscan
GO:0016235 all species →	Cellular Component	aggresome	Interproscan
GO:0035973 all species →	Biological Process	aggrephagy	Interproscan
GO:0044753 all species →	Cellular Component	amphisome	Interproscan
GO:0070530 all species →	Molecular Function	K63-linked polyubiquitin modification-dependent protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000032852.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.