Gene detail

Detailed information of BRAKERYMEP00000033047.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: RMX60975.1, hypothetical protein pdam_00024081, partial [Pocillopora damicornis]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000033047

ATGGTCCTCACTCTCTGCTGTCACGTAGAAACAAGATTTTCAAAGCGGAACCGTGGTGTTGAAGACCACGGATACAATCACCAGCGGCAAAATCAACCAGCCTCCAATGATCCTGAAATTGAGAGATTATCGCTGGAGAATGGAATCAAACGACAAAATTTGGACGCGTACCATGCCTTGTTCAACGGCAACCCGAAATGCAAAGAGCGGTATCTTGTTCCCATTGCATGGCACGTGATCTTTGACTCACAGGGGAGGGGTAATGTTTCAGACGCCACATTGGAGGATCAAATGCTGGTCTTAAACGAGGCTTTCTCAGACTCACCATTCCGCTTTAAAACGCGTTCAGTCGACAGAACAAGAAACGATGCATGGTTCAGAACATGTAGAGGCCATCGGTTTAAGCTGCGGGGGGCGCTTGGCATTTCACCAGCAACAACAGTAAATATTTACACGTGTGAGTTCAGAGATCAAGCAGTAATGGGCGATACAACGTTCCCGTGGCGAGCGACAGAGTCTGAATTACTTCATGGCGTGGCGATTCACTTTGAGACTTTGCCAGGTGGAATGAGGCCGCGGCATAACCTAGGGAAGAATGCAGTTCGCCAGATGGGTCGTTACTTTGGTCTTTATAACGTCTGTGAGGGTGGTTGCTAtaagaatgatgatgatgatgtcgcGGACACACCACGATGTTCAGATTACACCTACATATGCACCAACCAATCAGTGGACACATACATGGAAGATGCCTGTTTGTGGGAGTTTACGCCGGGGCAGATAGAAAAGATGGCGCGAGACGTCAAGCAATACAAACCGACTCTGATGAAAAACGTGTACAGGCCTTGCAAAATTGATGCTGTTTTCCGCTGGTCAAACGGATTCATCTATTTCTTCGCGGGAGCGAACTATTACCGCTACAACGAGACACGACATGGAATAGACCCAGGCTACCCACGGCCAATCAGTGATCACTGGAAGAGCGTCCCATCATCTGTAAATGGCGTTTTCAGATACCCCAATGGAGTAACGTATTTCTTTAAGGGAAACCGGTATTACAGGTTTAACGACTCTTCCCTGAGTGTGGATTCGGGTTATCCTCGATTGATAAGTGACTTCTGGGTGGGCGTGCCAGATGATATAGATGATGTCATCAGCTACTCGAATGGCTTCACTTACTTCTTCAAAGGATCGCAATACTACAGGTTCAATCCTAGCGCCCAAGACGTGGACCCCGGCTATCCGCTTCCCATACGCTCCTATTGGAAAGGGATCGCGGACGACATTGAAGGCGCTCTTCCTTGGCACAATGGAGGGGTGTATGTATTCAAAGATACGCAAATCTGGTTCTTTTTACACAGATCTGACTCAGCAGGTGTCCCATCCAGTTACCCCAAGTCGATCGCAAAATGGTGGAGCGATTCAGCAAGGACAACTGGTTACACTGTGCTTAGACATCGGAACGGCTACACATTCTTCTTTAAAGGCGACAGTTATTGGCGTTACAATGAGCAGCTAAGCAAAGTGGACATGGGGTATCCGCGTTCTATGGCAGTCTGGGGAGGAGTTCCGGCGGATGTCGATGCAGCGTTTGTTTGGAGTGATGGAGATGCCTACTTCTTTAAGGAAAATCTCTACTATCGGTACGACAGTGGCcaagaaaatgttcaaaatggGTATCCTAGAGAAATTAGCTCGTTCTGGAAAGGTGTACCCAATGACGTCGACGCAGTCTTCAGATACACCAACGGCATCACTTATTTCTTCAAGGATTCGCTTTACTACCGCTTCAACGATACTACCCGGATGTTGGACCCAGGCTACCCACGGTCGATAGCATCGTTTTGGAAAGGCGTTCCGGATAATCTTGATACGGTTTATACTTCACGATGTGGTCAAGGGTACTTCTTCAAAGGAAATCTCTTCTaccgtttcaaccaaacagCGAATGAAGTCGAAGCAGGATACCCCAAATCCTTAGCTTTATGGAAGGGGATACTATATCAGCCTTAG

Transcript

BRAKERYMET00000033047

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A4RGT4	Extracellular metalloprotease MGG_08041 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=MGG_08041 PE=3 SV=1
E3QKH9	Extracellular metalloprotease GLRG_06511 OS=Colletotrichum graminicola (strain M1.001 / M2 / FGSC 10212) OX=645133 GN=GLRG_06511 PE=3 SV=1
P50281	Matrix metalloproteinase-14 OS=Homo sapiens OX=9606 GN=MMP14 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0010105 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00045 all species →	Hemopexin	Hemopexin	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018487 all species →	Repeat	Hemopexin-like repeats	Interproscan
IPR000585 all species →	Domain	Hemopexin-like domain	Interproscan
IPR036375 all species →	Homologous_superfamily	Hemopexin-like domain superfamily	Interproscan
IPR018486 all species →	Conserved_site	Hemopexin, conserved site	Interproscan
IPR024079 all species →	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10201 all species →	MATRIX METALLOPROTEINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004222 all species →	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0030198 all species →	Biological Process	extracellular matrix organization	Interproscan
GO:0030574 all species →	Biological Process	collagen catabolic process	Interproscan
GO:0008237 all species →	Molecular Function	metallopeptidase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K07763	MMP14; matrix metalloproteinase-14 (membrane-inserted)	EC:3.4.24.80	Peptidases and inhibitors	ko01002	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.