Gene detail

Detailed information of BRAKERYMEP00000033055.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: CAH3038980.1, unnamed protein product [Porites lobata]
Species abbreviation AMYRI · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000033055

ATGCAGCGCCAGGTTTCTTTCTCCGGAATGGCCAGCAAACTAATGGACGCAACAAGCGAGAGGTCTAGGAAATTAAGCAGGAAAATCAACAAAATGGCGCGCGCGcaggaagaagaagaactacAGAGATTGAGGGAGGAAGAAGAAGTGGCACAACAGGCGaaaaagcaaaaagaagaagGATTTGCTAGCTCTGTTATCCATCGGAAGTTGTCCATATTTGGTTCCTATCGAAGAGTGTCGTTCCCTCGGGAAGTGCTAACGGATGAAGAGCACCAGAGAAAGTTGTCCGCCGCTAAAGGAGGGCTGAAGGGATTGCTATTAAGGCAACAGTTGACTTCTAATAAAACACGCAGCGATTTGCTCTGCGACGTAAGCTGTGAGGCACCGCAGGAAGCGAAGACTTTGAGAAGACTAATTCAGAACACTGACAGAATAATGGCAAGTATTTTTGACAACAAAACTGGAAAGAGCCGGGTCGTCAAGGATTGCTGGAAACAGCGAACGGTGAAAAGTAAATCTTACGCCAGAAGCCAGTCCGAAAATCAAGATCACAATTCCGCGGAACGCAAGGGGTTAGAGTTATTAGACATCCCTCGTTTGGGAGAATTGAGCCCGCACGAAACCTCGAATATTTCTCGTTACGTTTGTACACCTAGTTCTCATGATCTTGCTGGTGCTCCAAAGCTTCACTACGAACAAAGACCATCAAAGCTTCACAAAACGATGTCTCAGTCGGACGTCGAACTGAGAGGAGTCAAGCTCGTTGCTATAAACAACGAAAGAAACTTAACTCGAGCAAATAAACCCAGACTTGAACACAAGAATTTTTCTAACGAGCCAAGCTTAATGTTCAGAAAATCTCTGAGAAGGCGTGCTTCCCTTCCATCAAGCCACTTGGGAGAATATTTGTCGGTTAACAACATACGAAAAAGGGCACAAAACGGTGATGCGAACGAGTCAAACAGCGATGCCAGAGTGTCCATGAATAAAGTTAAAACCAAAAATCGAAGGGCAAAATTGAGGCTTCCTTCTACCATGGAATCAGATCCAGTGACAGAAACTGTAGATGAAACGGTTGCGGATTcgaaggaagaagaaaatccGACTGGAAATGATTTGGGCGAAGATACTTATCCGACGATAGCGCCAATCGAGAGATTTCGCAAGGTCGTTCAGCTTTTGAGCTTTCTACTGAAGATGAAAACGTCTATGGACAGAAAATACCGTTCGCAGAACTCTTCAAACGTGTTTGCTGAACTGGACGAGGAGGCTGTGACCGGGGTGGATTGTGACGGAATGGTGTTTGATCCAAACAATTTCAAGGCTAAGCGCGAGGTTCATCTCAGCCAGGAAGCCATTCACATCTTATCACTAAGTCCCGGATCTAGGACAGACGAGCAACTCCAAACGGCCCTAATCGCTCTGAAAACCAGCGTTGCTGCTTTTGGGGAGTATCCACTGAAGATGCAAAAGCGCCTGGTATCTGTAGGTTGGTATGAAAGGTTTGAGGCCAAGAGGGTCATTATAAGACAGGGGCATAAAGCGGAGAATTTCTATTTCATTCTCTCTGGAACAGcggTTGTTACGTTGTTGATAAATGATGCTACCACCAAAGAACAGAGAAACACAACTGTTGCAGTTCTGGGGAAAGGAAGCAGTTTTGGGGAACTGGCTTTGCTTCATCATAAGACGCGAAGTGCAACAGTTTTATGCAAAGACGAAGTGTCTCTGTTAGCTGTTTGTAGAGAGgATTTCCGAGATATTTTTATGAGTTACGAGGAGGGACGAGAACCAGAGCATATTCGATTTCTGAGAAGTGTACCGTACTTAAAGGATCTTCCACTGGATGATTTGACAACCAAACACGACGTCTGTATATTCCATTACTTCAGACGAGGTGTGGTCATCGTCAAAGAAAGCAAGACTAAATGGATCTACGTGGTAAAAACGGTAGGGTTCTTGTCGAGTTCTGACTCATTTATCAAAAAAGACCGCAAGGCTTACTCGGTCGGTAGCTGA

Transcript

BRAKERYMET00000033055

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8I719	cGMP-dependent protein kinase OS=Plasmodium falciparum (isolate 3D7) OX=36329 GN=PKG PE=1 SV=1
W7JX98	cGMP-dependent protein kinase OS=Plasmodium falciparum (isolate NF54) OX=5843 GN=PKG PE=1 SV=2
A5K0N4	cGMP-dependent protein kinase OS=Plasmodium vivax (strain Salvador I) OX=126793 GN=PKG PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001170 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00027 all species →	cNMP_binding	Cyclic nucleotide-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018490 all species →	Homologous_superfamily	Cyclic nucleotide-binding domain superfamily	Interproscan
IPR000595 all species →	Domain	Cyclic nucleotide-binding domain	Interproscan
IPR043533 all species →	Family	Cyclic nucleotide-binding domain-containing protein 1/2	Interproscan
IPR014710 all species →	Homologous_superfamily	RmlC-like jelly roll fold	Interproscan
IPR018488 all species →	Conserved_site	Cyclic nucleotide-binding, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23011 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

No Gene Ontology signature was detected for BRAKERYMEP00000033055.1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000033055.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.