Gene detail

Detailed information of BRAKERYMEP00000033531.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: CAH3108647.1, unnamed protein product [Porites lobata]
Species abbreviation AMYRI · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000033531

ATGCTGCTTCTAATCGGTGCATTGTATTTGCAAACTAACTGCTCTAGAAAGCCAGAAGTGCTCTTGCATAAGGTCTGTGACCCCTTGCTCAGAGGAATGGGGGCTGACCTTTGTGACTACGCATTGCGTGCCAACTTAGCTACCGAGAGGCGCGAGGAGATCCTGGGAACGAGCTACTCAGTCAGTGCCTCAGACAGTTCCTCAAACCCTTCCAAAACCACCATGTCAAGTACTGATGATCCGCTATGCTGGGCTTTGAACAGTCTACTCGATCCCGGGAGCGGGGACAAGTTCCTGGGGGTAACATACCAGACTAGTGTAATAGAAAACTGCTCTGAAGCTGATTGGGATGAGGACTTTGAGTGGCCCTTGGAGAGTCCGTTGGACCCCAGTGAATTCATTGAGATTGAAGTCTACAACTTcaacaaaatatttaacaacAGATTGGTTGGAGTATTTCGTATGGTACTTCAAAAGCTCATACAAGATGGGCACCTggaggtcatggaaagtcttATAGATATGAACAACACAGTGCTCAAGGCAACTGTTGAGTTGGAGTTACAGTACAACCCTCCAGAAGGAAATGTCTCCCAGTGGGTTACAAAAAACATTCATGATGCACTGGATGCCCCACCTCAGGTGGGCTACATGCCAGACACTCAATACCAGATGATGGATCCATATGAACGACGAGGCTCTTTCATTGGTGTGGGAAGTAACTTTGGTGGTAAGGCCTCTAAGAGCCAGTCAATGACAAGCTTAACCTCCAGCAGTCATCGGCAGTTGAGGAAGGAGTCAATGCCAGCGTCCATTGGAGGGGGTGGGAGGTTTATATCCCCTGAGGGTGGCGGAGGATCTCCTTTTGATGCCATGTTAAAAGGTGATGGAATCGGCAGTCGTCGAGGATCACAGATCAGCATGCACAGTGACCGCAGCATGAGCATGAAGTGTAGTCACGCGCATCCAAGAGTAAgagcagaaaagaaaatgtcCGTGAGAGAACAAGATTATCAGATACAGGTTCGCATCCTAGAAGGACGGCAATTCGCAGGTACACAGATTGATCCTGTCTGCACAGTCAGTGTTGGCAATCAGAAGAAGAGCACCACCATTAAAGAACAGACAAACTGTCCATTTTGGGATGAGTTCTTCGTCTATGACTTCAAGATGCCACCCATGGTCTTATTTGACAAGATCATTAACTTCCagGTATTCACTGGGAGAAATTTGGTCAGTCAAGGAATCCTTATTGGAGCCTTTAAGtTGGATGTCGGAACTGTTTATGCTCAACCAGATCACAGATTCTGTCGCAGATGGGCAGTGCTAACTGACCCTGAAGAAACATTGGGAGCTTCTGGTGCAGGCATCAAGGGCTACCTGAAAGTTGACATAACTGTGCTAGGCAAAGGTGATCCAGCCAAGGAACCTCCAGGCATTAaggacaatgatgatgacattgAAGGAAACCTGTTATTACCTGAGGGAGTTCCTGCAGAAAGACCAAAAGCCAGGATCATTGTGAAAATTTACAGAGCAGAGGGCCTCCCAAAGATGAATAGTGGGCTCATGGCCAATGTCAAGAAAGCTTTCACTGGAGAGGTGCGAGATCTTGTGGATCCTTATGTTGAAGTGTGCTTTGCAGGACACAAGGCCAGAACAACAGTAAAAAAGAACACATATGAACCAATGTGGAATGAACAGATTGTTTTCTCAGAACTGTTTCCTCCACTCTGCAGGAGAATGAAAATTCAACTGAAAGACAGTGACTCTGTGTCCGATGAGGTCATTGGAACTCACTTTATTGACCTTTCTCGAATCTCCAATGATGGAGCTAATGGTTTCATGCCAACATTTGGCCCATGTTGGGTCAATCTTTATGGATCCACAAGAGACTATTCTTTGTTTGATGAACACAATGATCTTAATAATGGATTGGGACAGGGTGTGGCTTACAGAGGACGATTGTTGATGGGTGTACAGGCAGAGTTTGGAGAATCTGCTTCAGAAGCCGGCATCCGTCAAGTGGAGGTGGAGCCCACAGCACCCATTTCTGATACCGCAGCAGGCAAAGAAGATCACTTCCAGTTATTTGCTTGTTTCTACGAAGCCAGCATGATTGAGAGGAAAGTTGGAGATAAGATGATACAGTTTGAAATGAGTATTGGTAACTTTGGAAACACAATTGATGGGCAGGCTCTATCAGGTACGGGTGAGACAGTGGAGGAGGTACGGAGGAATGGCGAGAATCCAAATATCCATCCTTTGACACCACCCGTTAGACCAGTTACGAATGACAGACAGTACTACCACATCCCATGGGAGGATTCCAAACCCTGTACACACATCAAGTTCACCTGGCAAGATCATCGCAGAAGGCTTTACAACTCTAATGTGCTGCTCAAGATCTGTGAGAGGCTGGAGGATGGGTTAACTGATTGCCTGGAGAGAGTGAAGATGGACTTGCCCAACACGTACAGATGGCTAAGTAGGGTCCTTGCCGAACTCATCAATGGCTGCAACCAGTACCTCAACTTGGTAAAGTCCATGCCATCTGCATCACATGTTGGCCGCACCAAACTGGATAAGGAGCGGCTGAAGCTGTGTCAATACGAAGTCGAATCTGTGTGTCAGTCAGCCCAGGAACTCAAGGGAAGTACAAGGGATGATGGGCATATCAAAGATAATCTCAAGGCTGCCAGTGCACTGCTTCAGAGACTGCTCAATATTGCTATTGAGCCACAAGAGACGACCCCAGATGTGTTCGTCTGGATGCTGTGCGGTGGCAAAAGAGTGGCGTACACTCGCATCCCAAGTCAGCATATTGTCTACTCACTGGTAGAAGAGGAGAGAGGCAAGGATGCTGGAAGAATGCAGACTGTGTTCCTTAGGCTTCCAGGGAAACGTGGGGATGGTCCTAAGGGATGGGCGATTCAAGCCAAACTGAATGTGATGATCTGGCTTGGCCTCCACAAACACAAGAAAGACTACCTCAAAGATGCACCGAAAGGATATCAGACGCCCAAGAATGCACACAAACTGATGGCTCCTCCACCAAACCATCTTATCTACACAGAGAAACAAAAGTTCATTTTGCGGGCACATACTTATCAGGCCAGGAGTTTGATTGGCAGTGATGCTTCAGGGCTTTCAGATGCTTTTGGTCGTGTCATCTTCACACACTTGGTATCAGACACTCGTGTGATCTGGGAGACGAGAAGTCCTACCTGGGACCAGATGCTGGTGTTCAAAGAGTTAGTTCTATGGGGTGACGTCAATGAAATTGCTGTGAACCCTCCCACTATTGTGGTTGAAGTGTTTGACAAAGATATTGGGGGTGATTCTGAGTTCATCGGCCGTGCGCTGGCAAGACCCATCGTTAAGATGGCTTGTGAACCGTATGAGAAGCCATTCTTCCCACCGGCACTGGAGTGGTTCCAGATCTTCAGGGGCGAGGAAAAGGCAGGAGAATTGCTTGCAGCCTTCGAGCTTTTGCAGCTGTCCGAGGGAACTTGCTTCCTTCCCACTGAAGTTGAACCAGTCAATACCCCGGATGGACCCATCACACCGGTGCCCATTGGTATCAGGCCAGTTATGAGGAAACACAGGATTGAGGTGCTATTTTGGGGTGTGCGCGAGATGAAGAGAATCAATCTGACAACAGTGGACAGGCCTCAAGTGGATATTGATCTGGCTGGCCAAGTGATACAGTCAACTGTTATTGCCAATGCAAAGAAGAATCCCAATTTCCAGAATCCTGTCATCTTCTTTGATGTGGAACTTCCAGAGAACGAGCGCTACTGCCCGCCGCTCACTATACGCGTCAGGGACTGCCGTACGTTTGGTCGGTTCACGCTCGTTGGTACGCATGTGCTGAACTCGCTTCACCGCTACTTGCAGAcaggagagaaagagaaagagaaactgGAGAAAGCAGAAGCTGTCGCTGGAGGCATCGGTAATGCTACCTCTCGCCCAACATCACCTGTTCCTGGAGCTGATATCGCCATTGAAATAGACGAGGATCCCCCCGACGCTGCAGACTCCGAACCACTGgagaaaaagaaacgatCTGGAGAAGGCGGAGGAGAGGAAGGAGGAAAAGGAGGcaaagggaaaggaaaggaagacGAAGATGCCGAAGATGCGCTGGATTGGTGGTCACGATACTACGAGACACTGAAGGACAGAGAAAGAGGCGAGAGGAGAGGAGAACAGCAGATGGCGAGGCAATCCAAGAAGAAAGATAAGACACCGGAGGAGagtgaagaggaaaaaatgaaaaagaaaatcccaAGGCTCACGATCTTCGACGCGGAGTTGGAGTTCTTGCCAGAGTACAACGGATTTAACGACTGGCTGAACGCTTTCCCACTCTACCGTGGCAAGAAAAGCAgcgaagatgatgatgatgaccacaGAATTGTTGGAAAGTTTAAGGGGTCTTTGAAAGTGTGGAAGTACCCCCTCCCTGAACACGTGGAAATGGACCCCATCGTTGGTACATTCCTCAAGTTACCCAGCAATGAACCTGTGAATATACTGGCGCGAGTTTACGTCATTAAGGCGATCAATCTGCACCCCTCTGATGTCAATGGGAAGGCTGACCCTTATCTAGTTGTCACCCTTGGAAAACACAAAGTGAGGGACCGCGATAACTACGTGTCAAAGCAACTCAACCCGGTTTTTGGAAGGTGCTTTGAATTCGAAGCCATCATCCCAATGGACTCGGTGTTAACTGTTGGTGTCTATGACTGGGATTTGGTGGGCAGTGATGATCTTATTGGTGAGACCAAAGTCGATTTGGAGAACAGATTTTACAGCCGGCATCGACCCACCTGTGGACTCCAGGAGAGCTATGCCACGTTTGGATTCAACAAATGGCGTGATCCAATGCGCCCGACCCAGCTCCTAGCCAAGATATGCAAAGATGAGGGACTGGACGGGCCGCACTATTCCACCGGGAGAGTTCGTATTGATAACAAAGTGTTTGGAGCCACCTCGCAAGTCTTGGAAGAAAGCGgtcatTTTAAACAGTCAGATGAGCCAGTAGCTCTCAAAGCTCTGCGCAATTTCGGCACACTGAAGAGAGGCTTTCCTCTGGTGCCAGAACACGTTGAGACAAGATCACTGTTTAACCCAGAAAAACCCGGCGTAGAACAGGGTAAAGTCGAGATGTGGGTCGACATGTTTCCCATGGATATGCCATCGCCTGGTGCTCCTGTGGACATCACTCCGCGAAAACCTACAAAttATGAGCTTCGGGTGGTCATCTGGAACACTGAAGATGTGCCACTAGAGGAGTCCAACATACTGACTGGAGAAAAGTGCAGCGACATCTTTGTCAAGGGTTGGCTTGAAGGACTAAAAGAAGACAGGCAACAGACAGATGTACACTACAGGTCACTGACTGGAGAGGGGAACTTCAACTGGAGGTTTGTCTTCCCATTCCAGTATCAGAAGGCGGAAGAGAGAATTGTCATTACTCGAAAGGCGAGTTTCTTTTCGTGGGACGAATCAGAGGAGAAAGTTCCCGCCAGGCTTCACCTGCAAGTATGGGATGCAGACGCCTTCTCTGCCGACGACTTTATTGGTGATTTGACACTGGACCTTACGCGCATGCCCCGTGGCGCTAAGAGCGCAAAGACATGCACTCTGGACATGTTGAAGCAGGATGGAAGTGTTCCCCAGGTCTCTTTCTTCAAAATCAAGCACATGAAGGGCTTCTGGCCATTCATGGTCAACACTGAAGAGGAGGAAATTGAATTGGCGGGTAAAGTGGAAGCTGAGCTTGAATTGCTGACCCAAGAAGAGGCTGAAAAGAAGCCCGCTGGACGGGCACGTGAAGATCCGCAGGCTCTTGAAAAACCCAACCGTCCAGACTCAACCTTCACGTGGTTCATGAACCCGTTCAAGTCTCTGAAGTACTTGTTATGGAATAACTACAAGATGTGCCTGATCAAGTTTCTGGTCATTGGATTGCTCGTGGCTCTTATGGGCCTGTTCTTTTACTCCATGCCTgATGCCAGTACAGATAACACCGAACAGCAAAGCAACACAATCATATTCAATGCATCCAAAGGAGAACTATTTACACCATCAAATGGATTTAAATCTCTGGTTCGAAAGTTAAGATCCAACTGGAAAGTGATCACGAACAAAGATGAAATAACCTTGGAACGAATAATAACAGCCAAAGTTATAATATTTGGAGGACCACGAAGAAAATTTACTGCAAGCGAGTTTGATGCCCTTAAACAGTACATTGAAAAAGGTGGGagccttttgtttttgttgggaGAAGGAGGCGAGTCAAGGTTTGACACCAACATCAACTTTCTCTTAGAAGACTATGGTATTATGGTGAACAATGattctGTGGTGAGAACTGTTTATTACAAGTATTTTCACCCCAAAGAGGTTTTAATATCTAATGGAGTCTTAAACAGAGAGATCAACCGAGCTGCTGGAAAATATGTTCCCGGATCGTCTGAGATTGATAACACTGATCTAGGACAatcgCTTACATTTGTCTACCCTTATGGTGCAACTTTGAATGTGGTCAAACCAGCTGTATCAGTTCTTTCAAGTGGCAGTGTCTCATTTCCTCTGAACAGACCAGTCTGCGCATTCCACTCATCAAGGTATTCAAAAGGCAAAATGGTTGTCTTGGGGTCTGTGCACATGTTTAGCGACCAGTATCTTgacaaagaagaaaatgctAAAGTTCAGGATGTGGTGTTTCAGTGGCTCACTACCAATGACATCCAACTCAACAATATTGATGCGGAAGACCCTGAGGTGTCAGATTACCATTACATTCCAGACACTCCAAAGATGTCAGAGAGATTAAGAGTTTGTCTTCAAGAGGGCGATGAGgTGAAAGACTCTATCTTTACACCAGAGCTAATTCTGTGTTATATAAATCCACAGAATGTAGGACGAGACATAACCAAAATGTTCAGTGAAGATCTGTTCAAGCTAGACACAAGTGTAGTCCCTGCCACAATAAGaGCATATGAGGATCTGAGAGTAAAACATGAACCTCTTCTTTTGATCACTCCTCAGTTTGAGACTCCACTTCCGCCACTTCAACCTGCAGTATTTCCTCCGACATTCCGTGAGCTACCCTCTCCGGCTTTGGATCTGTTTGACTTGGATGAGAGCTTCTCCTCAGAAAAGACAAGACTAGCACAGATAACCAACAAGTGTACTGAAGATGATCTTGAATATTATGTTCGTGAATGTGGAGATATTCTTGGTGTCTGTAGCAAACTGCCAGCTGATTGCAGAGATGCTAAGCACATCTTGGATTACATCTTCCATCAGGTGGTGGAATTCAAAAAGTTAAATCAGGAACCTCCTGATGATCCAAGCAATGAACCTGTTGCATTCATGGATGCCATGTAG

Transcript

BRAKERYMET00000033531

Protein

BRAKERYMEP00000033531.1

MLLLIGALYLQTNCSRKPEVLLHKVCDPLLRGMGADLCDYALRANLATERREEILGTSYSVSASDSSSNPSKTTMSSTDDPLCWALNSLLDPGSGDKFLGVTYQTSVIENCSEADWDEDFEWPLESPLDPSEFIEIEVYNFNKIFNNRLVGVFRMVLQKLIQDGHLEVMESLIDMNNTVLKATVELELQYNPPEGNVSQWVTKNIHDALDAPPQVGYMPDTQYQMMDPYERRGSFIGVGSNFGGKASKSQSMTSLTSSSHRQLRKESMPASIGGGGRFISPEGGGGSPFDAMLKGDGIGSRRGSQISMHSDRSMSMKCSHAHPRVRAEKKMSVREQDYQIQVRILEGRQFAGTQIDPVCTVSVGNQKKSTTIKEQTNCPFWDEFFVYDFKMPPMVLFDKIINFQVFTGRNLVSQGILIGAFKLDVGTVYAQPDHRFCRRWAVLTDPEETLGASGAGIKGYLKVDITVLGKGDPAKEPPGIKDNDDDIEGNLLLPEGVPAERPKARIIVKIYRAEGLPKMNSGLMANVKKAFTGEVRDLVDPYVEVCFAGHKARTTVKKNTYEPMWNEQIVFSELFPPLCRRMKIQLKDSDSVSDEVIGTHFIDLSRISNDGANGFMPTFGPCWVNLYGSTRDYSLFDEHNDLNNGLGQGVAYRGRLLMGVQAEFGESASEAGIRQVEVEPTAPISDTAAGKEDHFQLFACFYEASMIERKVGDKMIQFEMSIGNFGNTIDGQALSGTGETVEEVRRNGENPNIHPLTPPVRPVTNDRQYYHIPWEDSKPCTHIKFTWQDHRRRLYNSNVLLKICERLEDGLTDCLERVKMDLPNTYRWLSRVLAELINGCNQYLNLVKSMPSASHVGRTKLDKERLKLCQYEVESVCQSAQELKGSTRDDGHIKDNLKAASALLQRLLNIAIEPQETTPDVFVWMLCGGKRVAYTRIPSQHIVYSLVEEERGKDAGRMQTVFLRLPGKRGDGPKGWAIQAKLNVMIWLGLHKHKKDYLKDAPKGYQTPKNAHKLMAPPPNHLIYTEKQKFILRAHTYQARSLIGSDASGLSDAFGRVIFTHLVSDTRVIWETRSPTWDQMLVFKELVLWGDVNEIAVNPPTIVVEVFDKDIGGDSEFIGRALARPIVKMACEPYEKPFFPPALEWFQIFRGEEKAGELLAAFELLQLSEGTCFLPTEVEPVNTPDGPITPVPIGIRPVMRKHRIEVLFWGVREMKRINLTTVDRPQVDIDLAGQVIQSTVIANAKKNPNFQNPVIFFDVELPENERYCPPLTIRVRDCRTFGRFTLVGTHVLNSLHRYLQTGEKEKEKLEKAEAVAGGIGNATSRPTSPVPGADIAIEIDEDPPDAADSEPLEKKKRSGEGGGEEGGKGGKGKGKEDEDAEDALDWWSRYYETLKDRERGERRGEQQMARQSKKKDKTPEESEEEKMKKKIPRLTIFDAELEFLPEYNGFNDWLNAFPLYRGKKSSEDDDDDHRIVGKFKGSLKVWKYPLPEHVEMDPIVGTFLKLPSNEPVNILARVYVIKAINLHPSDVNGKADPYLVVTLGKHKVRDRDNYVSKQLNPVFGRCFEFEAIIPMDSVLTVGVYDWDLVGSDDLIGETKVDLENRFYSRHRPTCGLQESYATFGFNKWRDPMRPTQLLAKICKDEGLDGPHYSTGRVRIDNKVFGATSQVLEESGHFKQSDEPVALKALRNFGTLKRGFPLVPEHVETRSLFNPEKPGVEQGKVEMWVDMFPMDMPSPGAPVDITPRKPTNYELRVVIWNTEDVPLEESNILTGEKCSDIFVKGWLEGLKEDRQQTDVHYRSLTGEGNFNWRFVFPFQYQKAEERIVITRKASFFSWDESEEKVPARLHLQVWDADAFSADDFIGDLTLDLTRMPRGAKSAKTCTLDMLKQDGSVPQVSFFKIKHMKGFWPFMVNTEEEEIELAGKVEAELELLTQEEAEKKPAGRAREDPQALEKPNRPDSTFTWFMNPFKSLKYLLWNNYKMCLIKFLVIGLLVALMGLFFYSMPDASTDNTEQQSNTIIFNASKGELFTPSNGFKSLVRKLRSNWKVITNKDEITLERIITAKVIIFGGPRRKFTASEFDALKQYIEKGGSLLFLLGEGGESRFDTNINFLLEDYGIMVNNDSVVRTVYYKYFHPKEVLISNGVLNREINRAAGKYVPGSSEIDNTDLGQSLTFVYPYGATLNVVKPAVSVLSSGSVSFPLNRPVCAFHSSRYSKGKMVVLGSVHMFSDQYLDKEENAKVQDVVFQWLTTNDIQLNNIDAEDPEVSDYHYIPDTPKMSERLRVCLQEGDEVKDSIFTPELILCYINPQNVGRDITKMFSEDLFKLDTSVVPATIRAYEDLRVKHEPLLLITPQFETPLPPLQPAVFPPTFRELPSPALDLFDLDESFSSEKTRLAQITNKCTEDDLEYYVRECGDILGVCSKLPADCRDAKHILDYIFHQVVEFKKLNQEPPDDPSNEPVAFMDAM

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9ERC5	Otoferlin OS=Rattus norvegicus OX=10116 GN=Otof PE=1 SV=2
Q5SPC5	Otoferlin OS=Danio rerio OX=7955 GN=otof PE=3 SV=1
Q9HC10	Otoferlin OS=Homo sapiens OX=9606 GN=OTOF PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000314 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00168 all species →	C2	C2 domain	Domain	Interproscan
PF16165 all species →	Ferlin_C	Ferlin C-terminus	Family	Interproscan
PF08150 all species →	FerB	FerB (NUC096) domain	Domain	Interproscan
PF21178 all species →	Itf52_C	Intraflagellar transport protein 52, C-terminal domain	Domain	Interproscan
PF08151 all species →	FerI	FerI (NUC094) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000008 all species →	Domain	C2 domain	Interproscan
IPR035892 all species →	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR037724 all species →	Domain	Ferlin, fifth C2 domain	Interproscan
IPR037721 all species →	Family	Ferlin family	Interproscan
IPR037725 all species →	Domain	Ferlin, sixth C2 domain	Interproscan
IPR032362 all species →	Domain	Ferlin, C-terminal domain	Interproscan
IPR012968 all species →	Domain	FerIin domain	Interproscan
IPR037722 all species →	Domain	Ferlin, third C2 domain	Interproscan
IPR037723 all species →	Domain	Ferlin, fourth C2 domain	Interproscan
IPR037726 all species →	Domain	Ferlin, first C2 domain	Interproscan
IPR012561 all species →	Domain	Ferlin B-domain	Interproscan
IPR048643 all species →	Domain	Intraflagellar transport protein 52, C-terminal domain	Interproscan
IPR037720 all species →	Domain	Ferlin, second C2 domain	Interproscan
IPR029062 all species →	Homologous_superfamily	Class I glutamine amidotransferase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12546 all species →	FER-1-LIKE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007009 all species →	Biological Process	plasma membrane organization	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000033531.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.