Detailed information of BRAKERYMEP00000033583.1 in Astreopora myriophthalma

Genomic Location: BLFK01000983.1:1603778...1606037
NR annotation: XP_015769219.1, PREDICTED: ubiquitin carboxyl-terminal hydrolase 30-like isoform X3 [Acropora digitifera]
Species Astreopora myriophthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A4QNN3Ubiquitin carboxyl-terminal hydrolase 30 OS=Xenopus tropicalis OX=8364 GN=usp30 PE=2 SV=1
Q3UN04Ubiquitin carboxyl-terminal hydrolase 30 OS=Mus musculus OX=10090 GN=Usp30 PE=1 SV=1
D3ZPG5Ubiquitin carboxyl-terminal hydrolase 30 OS=Rattus norvegicus OX=10116 GN=Usp30 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004909 (this species only) · gene tree & orthology
Ubiquitin familyDUB|USP|USP · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00443
all species →		UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050185
all species →		FamilyUbiquitin carboxyl-terminal hydrolaseInterproscan
IPR028889
all species →		DomainUbiquitin specific protease domainInterproscan
IPR001394
all species →		DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR038765
all species →		Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR018200
all species →		Conserved_siteUbiquitin specific protease, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21646
all species →		UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004843
all species →		Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579
all species →		Biological Processprotein deubiquitinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERYMEP00000033583.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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