Gene detail

Detailed information of BRAKERYMEP00000033611.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_044164174.1, ubiquitin carboxyl-terminal hydrolase 32-like [Acropora millepora]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000033611

ATGGGTCTCAGAGAATCAAAACTTTCCTTCCTCTCGTATGAGGAAGCGACGAAGAGAGTGACGGACGATGAAATGCAACGCTTAAGGCTGGCGTTTAAACGCTGTTCTGGAGTTAGCGGATTTATGCCACAGCCGGTTTTTGCCCGAGAAGTTCTTGGCGATGGTGTACCAACTAAAGTCGCTGAGcaTATTTATGTAGCATTTGGGGGCAccaataagggaataacatttCGAGATTTGCTCTGTGGTCTTGTACTTCTGACTCGAGGCACACGTGAAGAGAAGATAAAATTCATTTTCAATATTTATTCTACCGACGGAGCCTTCGTCTACAAAGATAACATGGAGAGTTTAATTTTGGCTTGCGATGGAGGCAATATTCCTCAGCCAGTCATCGATTGCTTTTGTGAGTGTGATCGGCTGACATTTGAAGAGTTCTCCATTTGGTTGCTAAAAAACCCTGATGTAACAACGCTTACAAGGTGGCTCCTGATAGTGAGTAATGGCTGTAGCATGCAGTTGACAGACAACAGTGAGACACCAACATTTTACCAAACACTGGCCAGTGTCACTCATTtACAAGAAACAGATGTAATGGAACTCGAGAAGAGGTACTGGACTTTGAAATCTTTGACAAAAACTGGCAAATTTGATATGGAAACCTTCACTTCTCTTGTGTCTCCTCCCATTCCAGAGTGTCTTTGTCCAGGGCTTTTTAATGCTTTTGATGAAAATCAAGATGGCCACATTGATTTCCGTGAATTAGCTTGTAGCATATCCAAATGCTGCAGAGGTCCAAACCATGAAAGGCAAAAATTCTACTTTAGGGTATTTGATTGTGATGGAGATGGATTTCTCTCAAGAAGTGAGATTGAAGTGATGTGCAAAGCTCTCGCAGAaatcagaaaagaaaatgtaggCGAAAAGGATGCGAGTGCCATCTGGGACAAGGATCTGTCCTTAATGGCTACAGAAATACTCTGTGAGTGCAAGAAAGATGAGGATGGCCAAATCAGTTTAGAGGAGTACAAACAGTGGGCAGCTGGTCAATCATTTTCTCAATGGTTTCCCAAGTTGTTAGTCCAGGTCTGTCACATTGTTCTGGGGTTAAAGCCACTTACCAGAGAGGTTGAACGTCAAGTTGTCAGAGGATGGCTTGAGCGCGAGTACCAGCATGACCTTAAACCAAACAGTATGTGGTATCTGGTTGCAATATCATGGTGGCGGATCTGGAAAGAGCACCTCAGTTATCAGCCTTATGTTAGACGAAGCTCGACTGGGAATCTGCTCAGAAATGGCACAGTGCCATCCAGACTAGGGGAAGTCCCTAAGGCATCATTAGCAAACCCAGGACAGGCTTGGAGCAATAACTCAAGTCAGAAAACATTCACTCTACCACGACGTATATCACAACCTGTATTTAGTCATGGGCAAATGGCAGTGAGTCCATCTGAGGCCATGAATGGTCACTGCTCACAGGGGTCAGCATGTGGCACCCAAGTACCAGGCCCAATTGATAATGTCCCTCTCGTAGAAACTGAAACAAGGAAGGTGATGATTCTAACGGGTGAAGGAGGCAAATTAAAACGTAACATCCCGTTATGCAGAGGAAGAGATTTTGAGATTGTCCCTGAGCCTGTGTGGAGAGCTCTTCAGCAGTGGTATGGAGGTGGACCGGCTCTTCCAAGAACGGTCATTACACCAACCAATGGTGATCCAAACCCAGAGCTGGAACTCTATCCCATTGCAATGCGGCTCTTTCGGCACTCTCCACCTCCAACTCGTGGCGGCATCACCACATGGACAGGGGTTGGCTTTGGGCTGAGTACCTTTGGATTTGGCACCAATTCATTGACCACTCCTCATGCCCCACCAAAGAGGTACCTGGCATATGTGGCTTCTTTCAGTCGAATGAATACCATACAGCAGGTTTATGATTACCTCTGTACACGTCTCAGAATTCGTAATGAAGACATGCGTCTCTGGAGTATGGATGATGAGAACAAATTTAGACTTCTAGAGGAAGACAATTCTTCACTTGAAAAGTTGGAAATCAAAGACAATCATGCTGTGCTTATTGAAGTTCGGAACAGAGACATGAGTTGGCCAGAAGAGATGTCTTCCCTAGCAAATAATAGAAGTctcaaagaaaaactgaatttagAACCCACAGAAAAGGGAGCCACTGGTCTAAGTAACCTGGGAAACACATGCTTCATGAACTCTGCACTGCAGTGTCTCAGCAATACCCAGCCCCTGACTCAGTACTTTACAAACAAATGTCATTTGTATGAACTAAATAGGACGAACCCTTTAGGGATGAAAGGCCACATAGCACGTCGTTATGGAGACCTTACCCAAGACTTGTGGAGTGGCAGCTCACGCAGCTTAGCTCCTCTGAAACTTAGGTGGACAATTGGGAGGTATGCCCCAAGATTTAATGGGTTTCAGCAGCATGATTCCCAGGAATTCTTGTCATTTCTCTTGGATGGTTTACATGAAGACTTGAATAGAGTTCATCTTAAGCCTTATGTTGAACTAAAGGATAGTGATGGCAGACCAGATGAAGAAGTAGCACATGAGGCGTGGGACAATCACCTTAAGAGAAATCAGTCAGTTGTTGTGGACCTCTTTCAAGGCCAGctGAAATCTCAAGTCAGATGTTTAGAGTGTGGTTATGTCAGTGTGCGGTTTGATCCATTCACCTtcctctctcttcctttgcCCATGGACAGTTCAATCTATGTGGAAGTAATCGTTGTCAACCTTGAGGGAACAACGCCCACCAAATACGGTTTGCTACTCAATAATGACGACAGATACAAGGATGTTAAGAGAGAATTGTCCAAAGTTCATCTTAAGCCTTATGTTGAACTAAAGGATAGTGATGGCAGACCAGATGAAGAAGTAGCACATGAGGCATGGGACAATCACCTTAAGAGAAATCAGTCAGTTGTTGTGGACCTCTTTCAAGGCCAGCTGAAATCTCAAGTCAGATGTTTAGAGTGTGGTTATGTCAGTGTGCGGTTTGATCCATTCACCTtcctctctcttcctttgcCCATGGACAGTTCAATCTATGTGGAAGTAATCGGTGAGAGTTAG

Transcript

BRAKERYMET00000033611

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
F8VPZ3	Ubiquitin carboxyl-terminal hydrolase 32 OS=Mus musculus OX=10090 GN=Usp32 PE=2 SV=1
Q8NFA0	Ubiquitin carboxyl-terminal hydrolase 32 OS=Homo sapiens OX=9606 GN=USP32 PE=1 SV=1
M9PD06	Ubiquitin carboxyl-terminal hydrolase 32 OS=Drosophila melanogaster OX=7227 GN=Usp32 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003552 (this species only)
Ubiquitin family	DUB\|USP\|USP · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00443 all species →	UCH	Ubiquitin carboxyl-terminal hydrolase	Family	Interproscan
PF13202 all species →	EF-hand_5	EF hand	Domain	Interproscan
PF06337 all species →	DUSP	DUSP domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR028889 all species →	Domain	Ubiquitin specific protease domain	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR001394 all species →	Domain	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	Interproscan
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR018200 all species →	Conserved_site	Ubiquitin specific protease, conserved site	Interproscan
IPR006615 all species →	Domain	Peptidase C19, ubiquitin-specific peptidase, DUSP domain	Interproscan
IPR038765 all species →	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR035927 all species →	Homologous_superfamily	DUSP-like superfamily	Interproscan
IPR050185 all species →	Family	Ubiquitin carboxyl-terminal hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21646 all species →	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004843 all species →	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0016579 all species →	Biological Process	protein deubiquitination	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0005794 all species →	Cellular Component	Golgi apparatus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000033611.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.