Gene detail

Detailed information of BRAKERYMEP00000033752.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: AFP99909.1, peptidylglycine alpha-amidating monooxygenase 1 [Acropora millepora]
Species abbreviation AMYRI · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000033752

ATGAAGGCAACAGTTGACATAAGGAAAGGTGATATCCTGGCTGCACGCTGTACATATGAGTCAAAAGGACATGATATTCATGGAGCTGTTCACATGGGGTCGTCGGGCGATGATGAGATGTGCAATTTTTACATCATGTACTTCAGTAATGCAGAGCGTCTAGAATATGCGGGTGGCGACTGTGGTGAACAGAACCATCCCACCATTTTCAAGAATTTCCCTCCAGAATCTGACAGGCTTCCAGTTTTAATCCCCACTGCCAGCACTGCCGTACCTACACCCACTGAAATGCCTATGGGAGCTTCCACTTTAAGTGTTACCCCTACCATAAAGGCACATGAAGAATCTATTACTGATTTACAGGCTGCAATGACCTTACCTGTCATTCCTGCTGTGAATGTACCATCTGAACCAGTAAATCCTGTAACACAAGCAAGAAAAACAGAACAGCAATATCCAGAGCTGCATGTTATCAGTGACTGGCCGAATTTAACAGCTCTCAAAAAGTCCAAACTAGGACAAGTCACAGGAGTATCAGTAGACTCAAAAGGACAAGTTGTAGTGTTTCATCGGGGCACCAGAATATGGGACGATAGCACATTTGATTCTTCTAACGTTTTCCGAAACGCTGACATGGTTGGTACCATATCAGAACACACAGTGTGGATTATTGATTCTGTGACCGGAAAAGTGAAAGGATTTTGGGGCAAGGACTTATTTTACTTGCCACATGGCCTAACAATTGATCACCGGGATAATCTGTGGGTAACGGATGTTGGTAGTCATCAGGTGTTCAAGTTCTCCCCACTGAGTGATCGAACACAGCGTCTCCTTTCAATAGGAGACAAACTGGTCCCAGGTTCTGGAAATTCTCGATTCTGTAAACCGACGTCCATTGCTGTGGACGAAAACGGAGAATTCTTTGTTGCAGATGGttatTGCAATTCCCGCATTATGAAGTTTTCTTCCGCCGGAAAGCTGTTGAATATTTGGGGCAAACCGTCCTCAGGCCCAGATATCCCTGCGCTTGGGGCGTTTTTAATTCCTCACAGTCTTGCCTTGGACAGCGCAGGACACAGACTTTTCATTGCCGACAGAGAGAATGGTCGCGTCCAGGTGATGAATTCCAAATCCGGTGCCTTCAATGATGAAATCAAGTTACCAGAGTTTGGAGGACTTGTTTACGCTGTGGATTATAGTGAGAATGAACAGGGTGGAGTCTTACATGTTGTCAATGGGCCAAACAGTGTGGATTATAATCGGAAGAAGACGTTGCTCGTACAAGGGTTCACAATCAGAGTTGCTGATAAAGCCCTTATACAAACATGGCCCTCAAGTAAAGGACAGTTTCTCTCCCGAcctcacgacttggtttcatcTGCTGATGGTACTGAAGTGTATGTTGTGGAAATAGGTCCAAACAGAGTGTGGAAACTGtcatcaaaacaacaaactacGGTATCCACACCGATGTATTCTGTTCCTGCCATTACGAACGAGCTGTTTGGTGTTTCAGAAGGGAGTGGTCTTAATCCTAAACAGGCCCGCGGTAAAGGAAATACTTCGGATACAAAGACATCAAAACATCGCGGCTCGATTCGTGTAAAAGTGGTTgaagaaaaggcaaaactgATCCCGCTGGATCGTCAAGAATCTGTCCGGCCCGGCGATGGTGACGGTGGACAAATATCGAACATAACGACTGCAGACGCTAACGCTGAAGAATCCAGTGGCCCACAACAAGGTCGAGGTGGAGACAAGTCGAGTGTGAACTTAGGTCATCAAGATTCCACCGGTCAAGGGGACGCAGGTGTTGATTCTAACAGAGAAACGTCCAGTGAACATCGGCCAGATCACCAAGACTCCGATAGTCAAGGCCACGTTGTCAGTAGTAGTTCTCAAAAACCATCCCTCCACAACAGTACAACCGGTACAGAGAAAGTGCATTCGTCAGTCCATACGTCAGAGCCTACAGTTGTGTGGGTTAAAGTTACTCAAAAAGCCAATTTCAGACCGGCAGAGCCGGCAACTTCCGGCGCCAGTAAAAACGGACCAAAGAACGATGCCTTGGACAGCGATGACGAGGTTGATGACAGCGAAAACATCACTGAAGGTGTGATTCCCGCTCTCGTCGTTCTGTCAGTTCTCGCTGTTCCAATCGTTTTTCTCCTCCTCATTAGCATTGTAATTCGAATCCGCGCCTTCCGGCGGGACAAGAATCAGCAAGTGAACGGGTTCCATGCTAGCAAAAGCGATTTGTCAGTGGGGAGGACTCGGGGCTGGTGGTCGTACATGAATTGCTGTGACAGGCAGAGGTACAGGTTTAACAGGGTCACGCTATCGGACTTCTACAGTGATTCAGATAGTGATGGGGTTTAA

Transcript

BRAKERYMET00000033752

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P08478	Peptidyl-glycine alpha-amidating monooxygenase A OS=Xenopus laevis OX=8355 GN=pam-a PE=1 SV=3
P12890	Peptidyl-glycine alpha-amidating monooxygenase B OS=Xenopus laevis OX=8355 GN=pam-b PE=2 SV=1
Q9V5E1	Peptidyl-alpha-hydroxyglycine alpha-amidating lyase 1 OS=Drosophila melanogaster OX=7227 GN=Pal1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001143 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01436 all species →	NHL	NHL repeat	Repeat	Interproscan
PF03712 all species →	Cu2_monoox_C	Copper type II ascorbate-dependent monooxygenase, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001258 all species →	Repeat	NHL repeat	Interproscan
IPR024548 all species →	Domain	Copper type II ascorbate-dependent monooxygenase, C-terminal	Interproscan
IPR008977 all species →	Homologous_superfamily	PHM/PNGase F domain superfamily	Interproscan
IPR014784 all species →	Homologous_superfamily	Copper type II, ascorbate-dependent monooxygenase-like, C-terminal	Interproscan
IPR011042 all species →	Homologous_superfamily	Six-bladed beta-propeller, TolB-like	Interproscan
IPR000720 all species →	Family	Peptidylglycine alpha-hydroxylating monooxygenase/peptidyl-hydroxyglycine alpha-amidating lyase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10680 all species →	PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0005576 all species →	Cellular Component	extracellular region	Interproscan
GO:0016715 all species →	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen	Interproscan
GO:0006518 all species →	Biological Process	peptide metabolic process	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000033752.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.