Gene detail

Detailed information of BRAKERYMEP00000033763.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: CAH3030856.1, unnamed protein product [Porites evermanni]
Species abbreviation AMYRI · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000033763

ATGTGTTCAAATGATGTCATAAACAGAGCGCATGCGTCACCATGTTCACGTACCGCTGGTCAAATCCCTACGGGCGCGGTAATGGAGGCTGCCCTGGAGGCCTTAAGAGCAATCTCTGAGACAGATCAGGCCAAAAATGCGCTCTCTTTGATGCAAGTTTATTTCAACAACATAGTGAAAGAACCTGATAATCCAAAATACAGAAAAATTAGAATAAGTAATCCAAAATTCAATGCAGCCATCTGGCAGCTGGAACAGGCAAGGACCTTACTTTTGCTTTCAGGATTTGAACAGGAAGGGGAATTTCTTGTTCTTCCATCTTCAATAAAGCTAGATGGAACTAAACTGTTGATTGATGAAGCATTTGGAGTTGCAAACAGTGTTTCTTCAAATCAACCGAGACATATCATTCTTTGTTGTATTATTTTAGGAGAGAGCCTCTTTAATCAAGATGTGAAGGCCGACCTCACTTTGCTTTCATACATGAAAGAAATGGGTTATGATGTTAATGTTGCTGAGAAAGCTCTGGTTGCAACTAAGAACAAAGGGGTCCAGCCTGCTATTGATTGGATAAACCAGAATCCTTATGAAGCACATGTGAAATCAAAACAAGCTGCTGATATGCCAAAGAATGATACAAAGGCCACCAGTCATCCCCCTGATGCGAGCAGTTCCTCTGTTGCAGAAGGGGAATTTCTTGTTCTTCCATCTTCAATAAAGCTAGATGGAACTAAACTGTTGATTGATGAAGCATTTGGAGTTGCAAACAGTGTTTCTTCAAATCAACCGAGATATGTTAGTAGTGGTTCTTCCCATTCAAGTTTAAGTAGCACAGTGCTCAAACTTAGCTCACAAAAAGGCAAGTCATTCAAATACattaGGGAGAGCCTGTTTAATCAAGATGTGAAGGCCGACCTCACTTTGCTTTCATACATGAAAGAAATGGGTTATGATGTTAATGTTGCTGAGAAAGCTCTGGTTGCAACTAAGAACAAAGGGGTCCAGCCTGCTATTGATTGGATAAACCAGAATCCTTATGAAGCACATGTGAAATCAAAACAAGCTGCTGATATGCCAAAGAATGATACAAAGGCCACCAGTCAGCCCCCTGATGTGAGCAGTTCCTCTGTTTCACCTGCACCAGTATCTAGATACCAAAAGACAATTGCTGAGCGACATAAATTTCAGGAGAGAGTCAGGCTGGAAGCAATCGAAGAAGCAAAGTTGGAAaagcagagaaaaaaacttcaaagGGAATATTTGTTGAAAGATATGAAAgatgaaaaagatgaaaaattgGAAAAGGCAAAACACGCGAAACTGGGAGAGAGTGCATCAGAAGCTTCCACCAGTGCCACAGCTGATCATACGGTTGATGTTGGAACATCGCTCATGGTGGATTTGAAGATAAGATTACCAAACGGCGAGGTCTTGTCAATTAGTCTTTCCAGCGACTCAACGATTGAAGCATTGTACAAGGAGGTAAGTAGGCTGTGGCCTAAGAATGACAAGCAGGAGCCGACTGCAAGTGATTTCGTCctaatgacgtcatttccgcAAAGGAGAATCTCTGACATGGAAAGCAGTTTGGAGGCAGCAGGTTTGGGGAGGCGCGCAGCCCTTGTCGTGCAAAGAGCAGATCAGCAAGGGATGGTTACTAAAGGGGAAGGAGCAGTGGTTAACATACGAAACGTTACAAATATTGACCAGTGGAGGGAAGTTTTGAGTGTGCAAGACAAACTTGTTGTTGTACAGTTTTATGCCAGTTGgtgttCTTTGTGTAAGTCTGTGGTGGACTCGTATGATTCACTTAATGCCAAATATGGAATGAACGGACAGGTTATGTTTGCACGTGTGAATGTTGACGAACTGAAGGCGGTAACTCAAGTGGACGGGACTGACATGGTGTCGCTCGAGCAGCAGATCGGAGAAAGCGTCAATGGCCCCAAGGATGATAATCCACATGAGGAACCCTCGGGGAGCGACACGTATTTTGACCCCAGATGA

Transcript

BRAKERYMET00000033763

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9UW02	Thioredoxin OS=Coprinus comatus OX=56187 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006386 (this species only)
Ubiquitin family	UBD\|Alpha-Helix\|UBA · all ubiquitin genes in this species
Ubiquitin family	ULD\|UFD\|UBX · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00085 all species →	Thioredoxin	Thioredoxin	Domain	Interproscan
PF09409 all species →	PUB	PUB domain	Domain	Interproscan
PF00789 all species →	UBX	UBX domain	Domain	Interproscan
PF00627 all species →	UBA	UBA/TS-N domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036339 all species →	Homologous_superfamily	PUB-like domain superfamily	Interproscan
IPR001012 all species →	Domain	UBX domain	Interproscan
IPR013766 all species →	Domain	Thioredoxin domain	Interproscan
IPR015940 all species →	Domain	Ubiquitin-associated domain	Interproscan
IPR018997 all species →	Domain	PUB domain	Interproscan
IPR009060 all species →	Homologous_superfamily	UBA-like superfamily	Interproscan
IPR036249 all species →	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan
IPR029071 all species →	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46713 all species →	F13M7.16 PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000033763.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.