Gene detail

Detailed information of BRAKERYMEP00000034296.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_029209046.2, SH3 and PX domain-containing protein 2B-like [Acropora millepora]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000034296

ATGGAGCAAAAGACGGTGTTAACGGCCTGTGTGACTGGAACGTTATCTGCACAAGATGGAAAAGAATCTGAGGCGTACAAAATCACCGTTGTCTATTCAAACGGAAGCAAAACAGTGCTTCGAAAGACATACGAAGAGTTTGTTGATTTACAGGGAACCGTTTACGAGTTACTCAAGAAAAAGGCGGGATACTCAAGGAAAACGTCGAGAACACTTGTGTCCAATCTTCCAGATCTCAACTCATCGCTTTCCCGAATTCTGTTCAAAGAAAACGACTTGAAAAAGATGGCGAGATTGGATGCGTTCATCAAGGAGCTGCTCACTCTTCCGACTTCAGTCGTGGAATCTGAAGCTGTCATGACATTCTTTGGTGCCTTCATTGACCCAAAAGGAAGCACTGACCGGtttgaagacgaagaagaactGAAAAAGATTACTAAAGTTGCGGAAATGTTAAGAGGACGAGATCAACTTAGAGCTTTTCCTAAGTATACTCCGGAGCCAAATCGCAAGGCGTTTGCCCAGCAGAGTATATCTTGGATACCAGAAACGTTGAACGATGAAACAAGGGAGCAGATATATAAGAagctaaaggaaaaaaatccaaaCAAGCAAATTTCGCAGATGCCTGGGAGAAGAACAATATCTTCTACGGATGAAGACTTGGAGATGAGAACCAGGTCTCCGAGGCCAGGTTTGACAAGAAGACCTTTTAGTGTTGCTGTTAGTCTTTCAGAGATGTCCGAAGAAAATAACGAGGTGTTGGCACAAATTCAGGGCACAGGAAGCCCTGTTACCACGCCTACCTCTTCTCCCAGACCAGGTTTGACAAAGAGACCATTTAGCACTGCTATGGGCACGGCCGATATGTCCGAGGAGACAAAAATGTCCGAAGCACAACGATCGCAAAGTCCCCTTGCCTCACCAAGATCTCCGCGAGAGGCAAATACCGAGAGAGTCTCTCCCCCACCCGAGAACCAGAAAAATGGTGAGTCAGTTGACTCTGGAAAGAAAGAGCCTCGTGCCAGAAAGATATCATCCCAAACTGGAAGGCGAAGCCCCAACAATACAAAATACACCGCTGTTACCTCGTTTGACGGAGAGGAAAAGGGCGAGCTATCTCTTGAAGAAGGTGAGGAGGTCGAAGTGGTGCAGAAAGAGGCCAGTGGATGGTGGTATGTCAAAACTAGCTTCAGCGAGGGATGGGCACCAAGCGCCTTTCTGGTGCCTGCTCAATCGTCGCGGTCTTCATCGCCTGACTTCGGAAGTCAACCCCAGACTTCGGAAAGCATGCAGGAAGAGCCGAAGAAAGCGGATGAGGAATTTGATACCCCTAAAGGGCCCAACGAGCGGGAAAAACAGAAGACACTGTCGTTGACTCGAAACGCTGAAAGAGGTCTGCAGAGAGTGCCAAAAGAAATGAACCGACGAGTCAAATTCCTTACGGTTGAGGGTATTCAGAAACGCAAGAATCCAGACAAGAATTATGTTTACATTCTCAAAGTGGTTTGGTCTGATGGAACTATAAACATCGTTTACAGGCAGTgcagtgatttctttttccttcagGAAAACCTGAGAAAGGAATTTCCAACAGCCATTGGAAAGGAAATCCCTGTACTAAAAGGAAAGAAATTCACCGAAAATTGCCGATTTTGCTTCAAGGATGGGACGTGCAAAAGGAGGCAGTTTATGAATCAATTTTGCCATGAACTTATCAACGCTCCCGACAACATTTCAAGAAGTACTGCGGTCATGACCTTTTGCAAGCCTCGATCCAGCGATGTGCTTCCCCACGGACAcaATGATAAAAAGGATAACAAGACCTCTGGAAATAATGACGATGAGGAAGTCCAAATCACTGGACCAGTTGAATTTGAACAATACATTGTAGTTGCtgactacaaaaagaaaaacaagaacgaCATCTCTCTGACGGCTGGGGATACTGTTGACGTTATAGAGAGAAACGACTATGgtTGGTGGCTGGGCGNNNNNNNNNNAGGTTGGTGGCTGGTCGATCGTGAAGGAGAGTTAGGCTGGGCTCCAGCATCACATCTTGAACCGGTAGATGACGGATCAGAGATCACCACCTCAAAAACGTTTGCACCCGGACAAGAGGAGGTGTACCAGTCCATACAGAGCTATAAAGCTCAGGCCGAGGACGAATTGTCTTTTGATGTTGGTGTCATGCTGAAAGTTGTGGAGAGGAATTTGGATGGATGGTGGCTTGTGAGATATCAAGGCGACGAAGGATGGGCTCCAGCCATGTTCCTTAAGAAAGTCGCTGATTCTGATGACTCTCCAATTTCAGAGAATGGAAAATTGGACCAGCTAGATATTGTTTCCTTCAACGGAGATTCTGAAGGTGCCGATGGTAAAGCAATGAAACGAACACCTCCTACAAGGCGAAGCCAGGTTCAAAAATCAATCAGGAAAAAGCCAAAAGGAAACTGTGGCCCTCAAACGAAGGAAGCAACAATTCAAGAAGAACCAGAGTCTTTGGAAGCAAGAATGAATGGTGGATCAAATACAGCAGGAACTCAGTCGTCAACCTCATCTTCCAGTACCCGGTTATCGCCTCGACCCAAACTGAAGTCCAAATCAAGCGACTTTGCTCCAGGAGATTTAACACACCAGTGGTTAAACCGTGAGGTGTCTATATCGAGTGGATATGGCAGTTCTCCAAATGGTAGCCTCACCTCGCTTGTGTCAGATGTTTTCAACGCAGAGGAAAACGCTGCCCCGATCAAAAAGAGCGCCACGCTTCCACAATTTGAAGacgttgcagatgaaagtgtaATGCATCGATCACAATCAGTGACGTCTTTTGCACAATATAAGAAGGAAATGGAGTCAGCTGTAAATGACATCCCATTGTCAGGTAGAGGATCTCCTTCTGGGAGGCGGAGTCCTGTTCCAGCACCAAGGAAAATTTCCGCATCCAGGCCGAGTCCGTTGGCAGGATCACCACCAAGGAGTCAAGAAATGAAGGTGTCGCCCCGTAAGTCGAGCTCAGAGATGGAGTATGAAAGTAGTTCTGACTTCAACAACAGTTCAGAAACGCCGAGACGCTCATCTCCCATTCCCAGTCCAAGAAGGGAAAAGACAGAGTCAGTGTTTCGTGCACGGTATCCTTACATCTCCCAAGAGGATGGGGAAATTACATTCAACGTTGGAGACGTTGTCGAAGTTGTTCAACGAGGACAGAATGGGTGGTGGCTTCTGAAAAGTGACAAGGCTGGACTTGGTTGGGGACCCTCCAATTACCTCGAGTGTGTGGCTAATTGA

Transcript

BRAKERYMET00000034296

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5TCZ1	SH3 and PX domain-containing protein 2A OS=Homo sapiens OX=9606 GN=SH3PXD2A PE=1 SV=1
O89032	SH3 and PX domain-containing protein 2A OS=Mus musculus OX=10090 GN=Sh3pxd2a PE=1 SV=2
Q1LYG0	SH3 and PX domain-containing protein 2A OS=Danio rerio OX=7955 GN=sh3pxd2a PE=3 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007163 (this species only)
Ubiquitin family	UBD\|Other\|SH3 · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07653 all species →	SH3_2	Variant SH3 domain	Domain	Interproscan
PF00787 all species →	PX	PX domain	Domain	Interproscan
PF00018 all species →	SH3_1	SH3 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036871 all species →	Homologous_superfamily	PX domain superfamily	Interproscan
IPR036028 all species →	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR001452 all species →	Domain	SH3 domain	Interproscan
IPR001683 all species →	Domain	Phox homology	Interproscan
IPR051228 all species →	Family	NADPH Oxidase and PX Domain-Containing	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15706 all species →	SH3 MULTIPLE DOMAIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0035091 all species →	Molecular Function	phosphatidylinositol binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0016176 all species →	Molecular Function	superoxide-generating NADPH oxidase activator activity	Interproscan
GO:0042554 all species →	Biological Process	superoxide anion generation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24032	SH3PXD2; SH3 and PX domain-containing protein 2	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.